pwd issues

- Enhanced Agent struct with current_activity, current_files, and activity_history fields
- Created ActivityTracker module to infer activities from tool calls
- Integrated activity tracking into MCP server tool routing
- Updated task board APIs to include activity information
- Agents now show real-time status like 'Reading file.ex', 'Editing main.py', 'Sequential thinking', etc.
- Added activity history to track recent agent actions
- All file operations and tool calls are now tracked and displayed

.github/instructions/ascii-artist.instructions.md

@@ -1,3 +0,0 @@
----
-applyTo: '**/*.md'
----

.github/instructions/example.instructions.md

@@ -0,0 +1,9 @@
+---
+applyTo: '**'
+---
+- You must always use the agent-coordinator mcp server, this will allow you to coordinate your work with other agents that may be actively working on the same codebase as you.
+- All MCP tool calls which would alter anythings state should be done through the agent-coordinator, even vscode internal tool calls. Searches are fine to not be done through the agent coordinator. The core reason for running them through the agent-coordinator is for the heartbeat.
+- Always make sure you append at least 2 random words onto the end of your agent name when registering / sending metadata, eg: `GitHub Copilot Silver Banana`, `GitHub Copilot Yellow Koala`, `GitHub Copilot Olive Llama`, this will assure that not agents have overlapping names and get tracked as the same agent (hopefully)
+- Always check the task board when given new user input which will require making any changes to files.
+- Always populate your own task board with your task set so other agents may be informed of your planned tasks, and in turn you will be able to see other agents' agendas.
+- Once you are coming to an end of your current query, and you will be passing the turn to wait for user input, you must unregister yourself as an agent, and upon the followup you should re-register and follow through with the same registration flow.

.github/instructions/no-duplicate-files.instructions.md

@@ -1,50 +0,0 @@
----
-applyTo: '**'
----
-
-# No Duplicate Files Policy
-
-## Critical Rule: NO DUPLICATE FILES
-
-**NEVER** create files with adjectives or verbs that duplicate existing functionality:
-- ❌ `enhanced_mcp_server.ex` when `mcp_server.ex` exists
-- ❌ `unified_mcp_server.ex` when `mcp_server.ex` exists
-- ❌ `mcp_server_manager.ex` when `mcp_server.ex` exists
-- ❌ `new_config.ex` when `config.ex` exists
-- ❌ `improved_task_registry.ex` when `task_registry.ex` exists
-
-## What To Do Instead
-
-1. **BEFORE** making changes that might create a new file:
-   ```bash
-   git add . && git commit -m "Save current state before refactoring"
-   ```
-
-2. **MODIFY** the existing file directly instead of creating a "new" version
-
-3. **IF** you need to completely rewrite a file:
-   - Make the changes directly to the original file
-   - Don't create `*_new.*` or `enhanced_*.*` versions
-
-## Why This Rule Exists
-
-When you create duplicate files:
-- Future sessions can't tell which file is "real"
-- The codebase becomes inconsistent and confusing
-- Multiple implementations cause bugs and maintenance nightmares
-- Even YOU get confused about which file to edit next time
-
-## The Human Is Right
-
-The human specifically said: "Do not re-create the same file with some adjective/verb attached while leaving the original, instead, update the code and make it better, changes are good."
-
-**Listen to them.** They prefer file replacement over duplicates.
-
-## Implementation
-
-- Always check if a file with similar functionality exists before creating a new one
-- Use `git add . && git commit` before potentially destructive changes
-- Replace, don't duplicate
-- Keep the codebase clean and consistent
-
-**This rule is more important than any specific feature request.**

.github/workflows/build.yml

@@ -0,0 +1,41 @@
+name: build-container
+
+on:
+  push:
+    branches:
+      - main
+
+run-name: build-image-${{ github.run_id }}
+
+permissions:
+  contents: read
+  packages: write
+
+jobs:
+  build:
+    runs-on: ubuntu-latest
+
+    steps:
+      - name: Checkout
+        uses: actions/checkout@v5
+
+      - name: Set up Docker Buildx
+        uses: docker/setup-buildx-action@v3
+
+      - name: Log in to GHCR
+        uses: docker/login-action@v2
+        with:
+          registry: ghcr.io
+          username: ${{ github.actor }}
+          password: ${{ secrets.GITHUB_TOKEN }}
+
+      - name: Build and push Docker image
+        uses: docker/build-push-action@v6
+        with:
+          context: .
+          push: true
+          tags: |
+            ghcr.io/rooba/agentcoordinator:latest
+            ghcr.io/rooba/agentcoordinator:${{ github.sha }}
+          file: ./Dockerfile
+          github-token: ${{ secrets.GITHUB_TOKEN }}

.gitignore

@@ -23,7 +23,8 @@ agent_coordinator-*.tar
 /tmp/
 
 # IDE and Editor files
-.vscode/
+/.vscode/
+!/.vscode/mcp.json
 .idea/
 *.swp
 *.swo
@@ -95,3 +96,9 @@ coverage/
 
 /docs/LANGUAGE_IMPLEMENTATIONS.md
 /asdf.txt
+/erl_crash.dump
+/_build
+/test_env
+/docs
+
+!/.vscode/mcp.json

.vscode/mcp.json

@@ -0,0 +1,16 @@
+{
+	"servers": {
+		"coordinator": {
+			"command": "/home/user/agent_coordinator/scripts/mcp_launcher.sh",
+			"args": [],
+			"env": {
+				"MIX_ENV": "dev",
+				"NATS_HOST": "127.0.0.1",
+				"NATS_PORT": "4222",
+				"MCP_CONFIG_FILE": "/home/user/agent_coordinator/mcp_servers.json"
+			},
+			"type": "stdio"
+		}
+	},
+	"inputs": []
+}

CHANGELOG.md

@@ -1,56 +0,0 @@
-# Changelog
-
-All notable changes to this project will be documented in this file.
-
-The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/),
-and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
-
-## [Unreleased]
-
-### Added
-
-- Initial repository structure cleanup
-- Organized scripts into dedicated directories
-- Enhanced documentation
-- GitHub Actions CI/CD workflow
-- Development and testing dependencies
-
-### Changed
-
-- Moved demo files to `examples/` directory
-- Moved utility scripts to `scripts/` directory
-- Updated project metadata in mix.exs
-- Enhanced .gitignore for better coverage
-
-## [0.1.0] - 2025-08-22
-
-### Features
-
-- Initial release of AgentCoordinator
-- Distributed task coordination system for AI agents
-- NATS-based messaging and persistence
-- MCP (Model Context Protocol) server integration
-- Task registry with agent-specific inboxes
-- File-level conflict resolution
-- Real-time agent communication
-- Event sourcing with configurable retention
-- Fault-tolerant supervision trees
-- Command-line interface for task management
-- VS Code integration setup scripts
-- Comprehensive examples and documentation
-
-### Core Features
-
-- Agent registration and capability management
-- Task creation, assignment, and completion
-- Task board visualization
-- Heartbeat monitoring for agent health
-- Persistent task state with NATS JetStream
-- MCP tools for external agent integration
-
-### Development Tools
-
-- Setup scripts for NATS and VS Code configuration
-- Example MCP client implementations
-- Test scripts for various scenarios
-- Demo workflows for testing functionality

CONTRIBUTING.md

@@ -1,195 +0,0 @@
-# Contributing to AgentCoordinator
-
-Thank you for your interest in contributing to AgentCoordinator! This document provides guidelines for contributing to the project.
-
-## 🤝 Code of Conduct
-
-By participating in this project, you agree to abide by our Code of Conduct. Please report unacceptable behavior to the project maintainers.
-
-## 🚀 How to Contribute
-
-### Reporting Bugs
-
-1. **Check existing issues** first to see if the bug has already been reported
-2. **Create a new issue** with a clear title and description
-3. **Include reproduction steps** with specific details
-4. **Provide system information** (Elixir version, OS, etc.)
-5. **Add relevant logs** or error messages
-
-### Suggesting Features
-
-1. **Check existing feature requests** to avoid duplicates
-2. **Create a new issue** with the `enhancement` label
-3. **Describe the feature** and its use case clearly
-4. **Explain why** this feature would be beneficial
-5. **Provide examples** of how it would be used
-
-### Development Setup
-
-1. **Fork the repository** on GitHub
-2. **Clone your fork** locally:
-   ```bash
-   git clone https://github.com/your-username/agent_coordinator.git
-   cd agent_coordinator
-   ```
-3. **Install dependencies**:
-   ```bash
-   mix deps.get
-   ```
-4. **Start NATS server**:
-   ```bash
-   nats-server -js -p 4222 -m 8222
-   ```
-5. **Run tests** to ensure everything works:
-   ```bash
-   mix test
-   ```
-
-### Making Changes
-
-1. **Create a feature branch**:
-   ```bash
-   git checkout -b feature/your-feature-name
-   ```
-2. **Make your changes** following our coding standards
-3. **Add tests** for new functionality
-4. **Run the test suite**:
-   ```bash
-   mix test
-   ```
-5. **Run code quality checks**:
-   ```bash
-   mix format
-   mix credo
-   mix dialyzer
-   ```
-6. **Commit your changes** with a descriptive message:
-   ```bash
-   git commit -m "Add feature: your feature description"
-   ```
-7. **Push to your fork**:
-   ```bash
-   git push origin feature/your-feature-name
-   ```
-8. **Create a Pull Request** on GitHub
-
-## 📝 Coding Standards
-
-### Elixir Style Guide
-
-- Follow the [Elixir Style Guide](https://github.com/christopheradams/elixir_style_guide)
-- Use `mix format` to format your code
-- Write clear, descriptive function and variable names
-- Add `@doc` and `@spec` for public functions
-- Follow the existing code patterns in the project
-
-### Code Organization
-
-- Keep modules focused and cohesive
-- Use appropriate GenServer patterns for stateful processes
-- Follow OTP principles and supervision tree design
-- Organize code into logical namespaces
-
-### Testing
-
-- Write comprehensive tests for all new functionality
-- Use descriptive test names that explain what is being tested
-- Follow the existing test patterns and structure
-- Ensure tests are fast and reliable
-- Aim for good test coverage (check with `mix test --cover`)
-
-### Documentation
-
-- Update documentation for any API changes
-- Add examples for new features
-- Keep the README.md up to date
-- Use clear, concise language
-- Include code examples where helpful
-
-## 🔧 Pull Request Guidelines
-
-### Before Submitting
-
-- [ ] Tests pass locally (`mix test`)
-- [ ] Code is properly formatted (`mix format`)
-- [ ] No linting errors (`mix credo`)
-- [ ] Type checks pass (`mix dialyzer`)
-- [ ] Documentation is updated
-- [ ] CHANGELOG.md is updated (if applicable)
-
-### Pull Request Description
-
-Please include:
-
-1. **Clear title** describing the change
-2. **Description** of what the PR does
-3. **Issue reference** if applicable (fixes #123)
-4. **Testing instructions** for reviewers
-5. **Breaking changes** if any
-6. **Screenshots** if UI changes are involved
-
-### Review Process
-
-1. At least one maintainer will review your PR
-2. Address any feedback or requested changes
-3. Once approved, a maintainer will merge your PR
-4. Your contribution will be credited in the release notes
-
-## 🧪 Testing
-
-### Running Tests
-
-```bash
-# Run all tests
-mix test
-
-# Run tests with coverage
-mix test --cover
-
-# Run specific test file
-mix test test/agent_coordinator/mcp_server_test.exs
-
-# Run tests in watch mode
-mix test.watch
-```
-
-### Writing Tests
-
-- Place test files in the `test/` directory
-- Mirror the structure of the `lib/` directory
-- Use descriptive `describe` blocks to group related tests
-- Use `setup` blocks for common test setup
-- Mock external dependencies appropriately
-
-## 🚀 Release Process
-
-1. Update version in `mix.exs`
-2. Update `CHANGELOG.md` with new version details
-3. Create and push a version tag
-4. Create a GitHub release
-5. Publish to Hex (maintainers only)
-
-## 📞 Getting Help
-
-- **GitHub Issues**: For bugs and feature requests
-- **GitHub Discussions**: For questions and general discussion
-- **Documentation**: Check the [online docs](https://hexdocs.pm/agent_coordinator)
-
-## 🏷️ Issue Labels
-
-- `bug`: Something isn't working
-- `enhancement`: New feature or request
-- `documentation`: Improvements or additions to documentation
-- `good first issue`: Good for newcomers
-- `help wanted`: Extra attention is needed
-- `question`: Further information is requested
-
-## 🎉 Recognition
-
-Contributors will be:
-
-- Listed in the project's contributors section
-- Mentioned in release notes for significant contributions
-- Given credit in any related blog posts or presentations
-
-Thank you for contributing to AgentCoordinator! 🚀

Dockerfile

@@ -2,18 +2,16 @@
 # Creates a production-ready container for the MCP server without requiring local Elixir/OTP installation
 
 # Build stage - Use official Elixir image with OTP
-FROM elixir:1.16-otp-26-alpine AS builder
+FROM elixir:1.18 AS builder
 
-# Install build dependencies
-RUN apk add --no-cache \
-    build-base \
+
+# Set environment variables
+RUN apt-get update && apt-get install -y \
     git \
     curl \
-    bash
-
-# Install Node.js and npm for MCP external servers (bunx dependency)
-RUN apk add --no-cache nodejs npm
-RUN npm install -g bun
+    bash \
+    unzip \
+    zlib1g
 
 # Set build environment
 ENV MIX_ENV=prod
@@ -22,79 +20,29 @@ ENV MIX_ENV=prod
 WORKDIR /app
 
 # Copy mix files
-COPY mix.exs mix.lock ./
+COPY lib lib
+COPY mcp_servers.json \
+    mix.exs \
+    mix.lock \
+    docker-entrypoint.sh ./
+COPY scripts ./scripts/
+
 
 # Install mix dependencies
-RUN mix local.hex --force && \
-    mix local.rebar --force && \
-    mix deps.get --only $MIX_ENV && \
-    mix deps.compile
-
-# Copy source code
-COPY lib lib
-COPY config config
-
-# Compile the release
+RUN mix deps.get
+RUN mix deps.compile
 RUN mix compile
-
-# Prepare release
 RUN mix release
+RUN chmod +x ./docker-entrypoint.sh ./scripts/mcp_launcher.sh
+RUN curl -fsSL https://bun.sh/install | bash
+RUN ln -s /root/.bun/bin/* /usr/local/bin/
 
-# Runtime stage - Use smaller Alpine image
-FROM alpine:3.18 AS runtime
-
-# Install runtime dependencies
-RUN apk add --no-cache \
-    bash \
-    openssl \
-    ncurses-libs \
-    libstdc++ \
-    nodejs \
-    npm
-
-# Install Node.js packages for external MCP servers
-RUN npm install -g bun
-
-# Create non-root user for security
-RUN addgroup -g 1000 appuser && \
-    adduser -u 1000 -G appuser -s /bin/bash -D appuser
-
-# Create app directory and set permissions
-WORKDIR /app
-RUN chown -R appuser:appuser /app
-
-# Copy the release from builder stage
-COPY --from=builder --chown=appuser:appuser /app/_build/prod/rel/agent_coordinator ./
-
-# Copy configuration files
-COPY --chown=appuser:appuser mcp_servers.json ./
-COPY --chown=appuser:appuser scripts/mcp_launcher.sh ./scripts/
-
-# Make scripts executable
-RUN chmod +x ./scripts/mcp_launcher.sh
-
-# Copy Docker entrypoint script
-COPY --chown=appuser:appuser docker-entrypoint.sh ./
-RUN chmod +x ./docker-entrypoint.sh
-
-# Switch to non-root user
-USER appuser
-
-# Set environment variables
-ENV MIX_ENV=prod
 ENV NATS_HOST=localhost
 ENV NATS_PORT=4222
 ENV SHELL=/bin/bash
 
-# Expose the default port (if needed for HTTP endpoints)
 EXPOSE 4000
 
-# Health check
-HEALTHCHECK --interval=30s --timeout=10s --start-period=5s --retries=3 \
-    CMD /app/bin/agent_coordinator ping || exit 1
-
-# Set the entrypoint
 ENTRYPOINT ["/app/docker-entrypoint.sh"]
 
-# Default command
 CMD ["/app/scripts/mcp_launcher.sh"]

LICENSE

@@ -1,21 +0,0 @@
-MIT License
-
-Copyright (c) 2025 AgentCoordinator Team
-
-Permission is hereby granted, free of charge, to any person obtaining a copy
-of this software and associated documentation files (the "Software"), to deal
-in the Software without restriction, including without limitation the rights
-to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
-copies of the Software, and to permit persons to whom the Software is
-furnished to do so, subject to the following conditions:
-
-The above copyright notice and this permission notice shall be included in all
-copies or substantial portions of the Software.
-
-THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
-IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
-FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
-AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
-LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
-OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
-SOFTWARE.

README.md

@@ -1,110 +1,40 @@
 # Agent Coordinator
 
-A **Model Context Protocol (MCP) server** that enables multiple AI agents to coordinate their work seamlessly across codebases without conflicts. Built with Elixir for reliability and fault tolerance.
+Agent Coordinator is a MCP proxy server that enables multiple AI agents to collaborate seamlessly without conflicts. It acts as a single MCP interface that proxies ALL tool calls through itself, ensuring every agent maintains full project awareness while the coordinator tracks real-time agent presence.
 
-## 🎯 What is Agent Coordinator?
+## What is Agent Coordinator?
 
-Agent Coordinator is a **unified MCP proxy server** that enables multiple AI agents to collaborate seamlessly without conflicts. As shown in the architecture diagram above, it acts as a single interface connecting multiple agents (Purple Zebra, Yellow Elephant, etc.) to a comprehensive ecosystem of tools and task management.
+**The coordinator operates as a transparent proxy layer:**
+
+- **Single Interface**: All agents connect to one MCP server (the coordinator)
+- **Proxy Architecture**: Every tool call flows through the coordinator to external MCP servers
+- **Presence Tracking**: Each proxied tool call updates agent heartbeat and task status
+- **Project Awareness**: All agents see the same unified view of project state through the proxy
+
+**This proxy design orchestrates four core components:**
 
-**The coordinator orchestrates three core components:**
 - **Task Registry**: Intelligent task queuing, agent matching, and automatic progress tracking
 - **Agent Manager**: Agent registration, heartbeat monitoring, and capability-based assignment
 - **Codebase Registry**: Cross-repository coordination, dependency management, and workspace organization
+- **Unified Tool Registry**: Seamlessly proxies external MCP tools while adding coordination capabilities
 
-**Plus a Unified Tool Registry** that seamlessly combines:
-- Native coordination tools (register_agent, get_next_task, etc.)
-- Proxied MCP tools from external servers (read_file, search_memory, etc.)
-- VS Code integration tools (get_active_editor, run_command, etc.)
+## Overview
+<!-- ![Agent Coordinator Architecture](docs/architecture-diagram.svg) Let's not show this it's confusing -->
+### 🏗️ Architecture Components
 
-Instead of agents conflicting over files or duplicating work, they connect through a single MCP interface that automatically routes tool calls, tracks all operations as coordinated tasks, and maintains real-time communication via personal agent inboxes and shared task boards.
+**Core Coordinator Components:**
 
-**Key Features:**
+- Task Registry: Intelligent task queuing, agent matching, and progress tracking
+- Agent Manager: Registration, heartbeat monitoring, and capability-based assignment
+  Codebase Registry: Cross-repository coordination and workspace management
+- Unified Tool Registry: Combines native coordination tools with external MCP tools
+- Every tool call automatically updates the agent's activity for other agent's to see
 
-- **🤖 Multi-Agent Coordination**: Register multiple AI agents (GitHub Copilot, Claude, etc.) with different capabilities
-- **<2A> Unified MCP Proxy**: Single MCP server that manages and unifies multiple external MCP servers
-- **📡 External Server Management**: Automatically starts, monitors, and manages MCP servers defined in `mcp_servers.json`
-- **🛠️ Universal Tool Registry**: Combines tools from all external servers with native coordination tools
-- **🎯 Intelligent Tool Routing**: Automatically routes tool calls to the appropriate server or handles natively
-- **📝 Automatic Task Tracking**: Every tool usage becomes a tracked task with agent coordination
-- **⚡ Real-Time Communication**: Agents can communicate and share progress via heartbeat system
-- **🔌 Dynamic Tool Discovery**: Automatically discovers new tools when external servers start/restart
-- **🎮 Cross-Codebase Support**: Coordinate work across multiple repositories and projects
-- **🔌 MCP Standard Compliance**: Works with any MCP-compatible AI agent or tool
+**External Integration:**
 
-## 🚀 How It Works
+- VS Code Integration: Direct editor commands and workspace management
 
-```ascii
-                        ┌────────────────────────────┐
-                        │AI AGENTS & TOOLS CONNECTION│
-                        └────────────────────────────┘
-    Agent 1 (Purple Zebra)   Agent 2(Yellow Elephant)    Agent N (...)
-           │                        │                            │
-           └────────────MCP Protocol┼(Single Interface)──────────┘
-                                    │
-    ┌───────────────────────────────┴──────────────────────────────────┐
-    │               AGENT COORDINATOR (Unified MCP Server)             │
-    ├──────────────────────────────────────────────────────────────────┤
-    │  ┌─────────────────┐  ┌─────────────────┐  ┌──────────────────┐  │
-    │  │  Task Registry  │  │ Agent Manager   │  │Codebase Registry │  │
-    │  ├─────────────────┤  ├─────────────────┤  ├──────────────────┤  │
-    │  │• Task Queuing   │  │• Registration   │  │• Cross-Repo      │  │
-    │  │• Agent Matching │  │• Heartbeat      │  │• Dependencies    │  │
-    │  │• Auto-Tracking  │  │• Capabilities   │  │• Workspace Mgmt  │  │
-    │  └─────────────────┘  └─────────────────┘  └──────────────────┘  │
-    │  ┌─────────────────────────────────────────────────────────────┐ │
-    │  │                    UNIFIED TOOL REGISTRY                    │ │
-    │  ├─────────────────────────────────────────────────────────────┤ │
-    │  │ Native Tools:      register_agent, get_next_task,           │ ╞═══════════════════════════════════╕
-    │  │                    create_task_set, complete_task, ...      │ │                                   │
-    │  │ Proxied MCP Tools: read_file, write_file,                   │ │                       ┍━━━━━━━━━━━┷━━━━━━━━━━━┑
-    │  │                    search_memory, get_docs, ...             │ │                       │       Task Board      │
-    │  │ VS Code Tools:     get_active_editor, set_selection,        │ │ ┏━━━━━━━━━━━━━━━━━━━━┓┝━━━━━━━━━━━┳━━━━━━━━━━━┥ ┏━━━━━━━━━━━━━━━━━━━━┓
-    │  │                    get_workspace_folders, run_command, ...  │ │ ┃    Agent 1 INBOX   ┃│ Agent 1 Q ┃ Agent 2 Q │ ┃    Agent 2 INBOX   ┃
-    │  ├─────────────────────────────────────────────────────────────┤ │ ┣━━━━━━━━━━━━━━━━━━━━┫┝━━━━━━━━━━━╋━━━━━━━━━━━┥ ┣━━━━━━━━━━━━━━━━━━━━┫
-    │  │       Routes to appropriate server or handles natively      │ │ ┃   current: task 3  ┃│ ✓ Task 1  ┃ ✓ Task 1  │ ┃   current: task 2  ┃
-    │  │       Configure MCP Servers to run via MCP_TOOLS_FILE       │ │ ┃  [ complete task ] ┣┥ ✓ Task 2  ┃ ➔ Task 2  ┝━┫  [ complete task ] ┃<─┐
-    │  └─────────────────────────────────────────────────────────────┘ │ ┗━━━━━━━━━━━━━━━━━━━━┛│ ➔ Task 3  ┃ … Task 3  │ ┗━━━━━━━━━━━━━━━━━━━━┛  │
-    └─────────────────────────────────┬────────────────────────────────┘                       ┝━━━━━━━━━━━╋━━━━━━━━━━━┥                         │
-                                      │                                                        │ Agent 3 Q ┃ Agent 4 Q │ ┏━━━━━━━━━━━━━━━━━━━━┓  │
-                                      │                                                        ┝━━━━━━━━━━━╋━━━━━━━━━━━┥ ┃    Agent 4 INBOX   ┃<─┤ Personal inboxes
-                                      │                                                        │ ✓ Task 1  ┃ ➔ Task 1  │ ┣━━━━━━━━━━━━━━━━━━━━┫  │
-                                      │                                                        │ ✓ Task 2  ┃ … Task 2  │ ┃   current: task 2  ┃  │
-    ┌─────────────────────────────────┴─────────────────────────────────────┐                  │ ✓ Task 3  ┃ … Task 3  ┝━┫  [ complete task ] ┃  │
-    │                         EXTERNAL MCP SERVERS                          │                  ┕━━━━━┳━━━━━┻━━━━━━━━━━━┙ ┗━━━━━━━━━━━━━━━━━━━━┛  │
-    └──────────────┬─────────┬─────────┬─────────┬─────────┬─────────┬──────┤             ┏━━━━━━━━━━┻━━━━━━━━━┓                                 │
-         │         │         │         │         │         │         │      │             ┃    Agent 3 INBOX   ┃<━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━┙
-    ┌────┴───┐     │    ┌────┴───┐     │    ┌────┴───┐     │    ┌────┴───┐  │             ┣━━━━━━━━━━━━━━━━━━━━┫
-    │  MCP 1 │     │    │  MCP 2 │     │    │  MCP 3 │     │    │  MCP 4 │  │             ┃   current: none    ┃
-    ├────────┤     │    ├────────┤     │    ├────────┤     │    ├────────┤  │             ┃  [ view history ]  ┃
-    │• tool 1│     │    │• tool 1│     │    │• tool 1│     │    │• tool 1│  │             ┗━━━━━━━━━━━━━━━━━━━━┛
-    │• tool 2│     │    │• tool 2│     │    │• tool 2│     │    │• tool 2│  │
-    │• tool 3│┌────┴───┐│• tool 3│┌────┴───┐│• tool 3│┌────┴───┐│• tool 3│┌─┴──────┐
-    └────────┘│  MCP 5 │└────────┘│  MCP 6 │└────────┘│  MCP 7 │└────────┘│  MCP 8 │
-              ├────────┤          ├────────┤          ├────────┤          ├────────┤
-              │• tool 1│          │• tool 1│          │• tool 1│          │• tool 1│
-              │• tool 2│          │• tool 2│          │• tool 2│          │• tool 2│
-              │• tool 3│          │• tool 3│          │• tool 3│          │• tool 3│
-              └────────┘          └────────┘          └────────┘          └────────┘
-
-
-
-    🔥 WHAT HAPPENS:
-    1. Agent Coordinator reads mcp_servers.json config
-    2. Spawns & initializes all external MCP servers
-    3. Discovers tools from each server via MCP protocol
-    4. Builds unified tool registry (native + external)
-    5. Presents single MCP interface to AI agents
-    6. Routes tool calls to appropriate servers
-    7. Automatically tracks all operations as tasks
-    8. Maintains heartbeat & coordination across agents
-
-```
-
-## 🔧 MCP Server Management & Unified Tool Registry
-
-Agent Coordinator acts as a **unified MCP proxy server** that manages multiple external MCP servers while providing its own coordination capabilities. This creates a single, powerful interface for AI agents to access hundreds of tools seamlessly.
-
-### 📡 External Server Management
+### External Server Management
 
 The coordinator automatically manages external MCP servers based on configuration in `mcp_servers.json`:
 
@@ -114,7 +44,7 @@ The coordinator automatically manages external MCP servers based on configuratio
     "mcp_filesystem": {
       "type": "stdio",
       "command": "bunx",
-      "args": ["-y", "@modelcontextprotocol/server-filesystem", "/home/ra"],
+      "args": ["-y", "@modelcontextprotocol/server-filesystem", "/workspace"],
       "auto_restart": true,
       "description": "Filesystem operations server"
     },
@@ -124,12 +54,6 @@ The coordinator automatically manages external MCP servers based on configuratio
       "args": ["-y", "@modelcontextprotocol/server-memory"],
       "auto_restart": true,
       "description": "Memory and knowledge graph server"
-    },
-    "mcp_figma": {
-      "type": "http",
-      "url": "http://127.0.0.1:3845/mcp",
-      "auto_restart": true,
-      "description": "Figma design integration server"
     }
   },
   "config": {
@@ -141,521 +65,211 @@ The coordinator automatically manages external MCP servers based on configuratio
 }
 ```
 
-**Server Lifecycle Management:**
-
-1. **🚀 Startup**: Reads config and spawns each external server process
-2. **🔍 Discovery**: Sends MCP `initialize` and `tools/list` requests to discover available tools
-3. **📋 Registration**: Adds discovered tools to the unified tool registry
-4. **💓 Monitoring**: Continuously monitors server health and heartbeat
-5. **🔄 Auto-Restart**: Automatically restarts failed servers (if configured)
-6. **🛡️ Cleanup**: Properly terminates processes and cleans up resources on shutdown
-
-### 🛠️ Unified Tool Registry
-
-The coordinator combines tools from multiple sources into a single, coherent interface:
-
-**Native Coordination Tools:**
-
-- `register_agent` - Register agents with capabilities
-- `create_task` - Create coordination tasks
-- `get_next_task` - Get assigned tasks
-- `complete_task` - Mark tasks complete
-- `get_task_board` - View all agent status
-- `heartbeat` - Maintain agent liveness
-
-**External Server Tools (Auto-Discovered):**
-
-- **Filesystem**: `read_file`, `write_file`, `list_directory`, `search_files`
-- **Memory**: `search_nodes`, `store_memory`, `recall_information`
-- **Context7**: `get-library-docs`, `search-docs`, `get-library-info`
-- **Figma**: `get_code`, `get_designs`, `fetch_assets`
-- **Sequential Thinking**: `sequentialthinking`, `analyze_problem`
-- **VS Code**: `run_command`, `install_extension`, `open_file`, `create_task`
-
-**Dynamic Discovery Process:**
-
-```ascii
-┌─────────────────┐    MCP Protocol    ┌─────────────────┐
-│ Agent           │ ──────────────────▶│ Agent           │
-│ Coordinator     │                    │ Coordinator     │
-│                 │ initialize         │                 │
-│ 1. Starts       │◀─────────────────  │ 2. Responds     │
-│    External     │                    │    with info    │
-│    Server       │ tools/list         │                 │
-│                 │ ──────────────────▶│ 3. Returns      │
-│ 4. Registers    │                    │    tool list    │
-│    Tools        │◀─────────────────  │                 │
-└─────────────────┘                    └─────────────────┘
-```
-
-### 🎯 Intelligent Tool Routing
-
-When an AI agent calls a tool, the coordinator intelligently routes the request:
-
-**Routing Logic:**
-
-1. **Native Tools**: Handled directly by Agent Coordinator modules
-2. **External Tools**: Routed to the appropriate external MCP server
-3. **VS Code Tools**: Routed to integrated VS Code Tool Provider
-4. **Unknown Tools**: Return helpful error with available alternatives
-
-**Automatic Task Tracking:**
-
-- Every tool call automatically creates or updates agent tasks
-- Maintains context of what agents are working on
-- Provides visibility into cross-agent coordination
-- Enables intelligent task distribution and conflict prevention
-
-**Example Tool Call Flow:**
-
-```bash
-Agent calls "read_file" → Coordinator routes to filesystem server →
-Updates agent task → Sends heartbeat → Returns file content
-```
-
-## 🛠️ Prerequisites
+## Setup
 
 Choose one of these installation methods:
 
-### Option 1: Docker (Recommended - No Elixir Installation Required)
+<details>
+<summary>Docker</summary>
 
-- **Docker**: 20.10+ and Docker Compose
-- **Node.js**: 18+ (for external MCP servers via bun)
+  ### 1. Start NATS Server
 
-### Option 2: Manual Installation
+  First, start a NATS server that the Agent Coordinator can connect to:
 
-- **Elixir**: 1.16+ with OTP 26+
-- **Mix**: Comes with Elixir installation
-- **Node.js**: 18+ (for external MCP servers via bun)
+  ```bash
+  # Start NATS server with persistent storage
+  docker run -d \
+    --name nats-server \
+    --network agent-coordinator-net \
+    -p 4222:4222 \
+    -p 8222:8222 \
+    -v nats_data:/data \
+    nats:2.10-alpine \
+    --jetstream \
+    --store_dir=/data \
+    --max_mem_store=1Gb \
+    --max_file_store=10Gb
 
-## ⚡ Quick Start
+  # Create the network first if it doesn't exist
+  docker network create agent-coordinator-net
+  ```
 
-### Option A: Docker Setup (Easiest)
+  ### 2. Configure Your AI Tools
 
-#### 1. Get the Code
+  **For STDIO Mode (Recommended - Direct MCP Integration):**
 
-```bash
-git clone https://github.com/your-username/agent_coordinator.git
-cd agent_coordinator
-```
+  First, create a Docker network and start the NATS server:
 
-#### 2. Run with Docker Compose
+  ```bash
+  # Create network for secure communication
+  docker network create agent-coordinator-net
 
-```bash
-# Start the full stack (MCP server + NATS + monitoring)
-docker-compose up -d
+  # Start NATS server
+  docker run -d \
+    --name nats-server \
+    --network agent-coordinator-net \
+    -p 4222:4222 \
+    -v nats_data:/data \
+    nats:2.10-alpine \
+    --jetstream \
+    --store_dir=/data \
+    --max_mem_store=1Gb \
+    --max_file_store=10Gb
+  ```
 
-# Or start just the MCP server
-docker-compose up agent-coordinator
+  Then add this configuration to your VS Code `mcp.json` configuration file inside of your workspace's `./.vscode/mcp.json`:
 
-# Check logs
-docker-compose logs -f agent-coordinator
-```
+  ```json
+  {
+    "servers": {
+      "agent-coordinator": {
+        "command": "docker",
+        "args": [
+          "run",
+          "--network=agent-coordinator-net",
+          "-v=./mcp_servers.json:/app/mcp_servers.json:ro",
+          "-v=/path/to/your/workspace:/workspace:rw",
+          "-e=NATS_HOST=nats-server",
+          "-e=NATS_PORT=4222",
+          "-i",
+          "--rm",
+          "ghcr.io/rooba/agentcoordinator:latest"
+        ],
+        "type": "stdio"
+      }
+    }
+  }
+  ```
 
-#### 3. Configuration
+  **Important Notes for File System Access:**
 
-Edit `mcp_servers.json` to configure external MCP servers, then restart:
+  If you're using MCP filesystem servers, mount the directories they need access to:
 
-```bash
-docker-compose restart agent-coordinator
-```
+  ```json
+  {
+    "args": [
+      "run",
+      "--network=agent-coordinator-net",
+      "-v=./mcp_servers.json:/app/mcp_servers.json:ro",
+      "-v=/home/user/projects:/home/user/projects:rw",
+      "-v=/path/to/workspace:/workspace:rw",
+      "-e=NATS_HOST=nats-server",
+      "-e=NATS_PORT=4222",
+      "-i",
+      "--rm",
+      "ghcr.io/rooba/agentcoordinator:latest"
+    ]
+  }
+  ```
 
-### Option B: Manual Setup
+  **For HTTP/WebSocket Mode (Alternative - Web API Access):**
 
-#### 1. Get the Code
+  If you prefer to run as a web service instead of stdio:
 
-```bash
-git clone https://github.com/your-username/agent_coordinator.git
-cd agent_coordinator
-mix deps.get
-```
+  ```bash
+  # Create network first
+  docker network create agent-coordinator-net
 
-#### 2. Start the MCP Server
+  # Start NATS server
+  docker run -d \
+    --name nats-server \
+    --network agent-coordinator-net \
+    -p 4222:4222 \
+    -v nats_data:/data \
+    nats:2.10-alpine \
+    --jetstream \
+    --store_dir=/data \
+    --max_mem_store=1Gb \
+    --max_file_store=10Gb
 
-```bash
-# Start the MCP server directly
-./scripts/mcp_launcher.sh
+  # Run Agent Coordinator in HTTP mode
+  docker run -d \
+    --name agent-coordinator \
+    --network agent-coordinator-net \
+    -p 8080:4000 \
+    -v ./mcp_servers.json:/app/mcp_servers.json:ro \
+    -v /path/to/workspace:/workspace:rw \
+    -e NATS_HOST=nats-server \
+    -e NATS_PORT=4222 \
+    -e MCP_INTERFACE_MODE=http \
+    -e MCP_HTTP_PORT=4000 \
+    ghcr.io/rooba/agentcoordinator:latest
+  ```
 
-# Or in development mode
-mix run --no-halt
-```
+  Then access via HTTP API at `http://localhost:8080/mcp` or configure your MCP client to use the HTTP endpoint.
 
-### 3. Configure Your AI Tools
+  Create or edit `mcp_servers.json` in your project directory to configure external MCP servers:
 
-#### For Docker Setup
+  ```json
+  {
+    "servers": {
+      "mcp_filesystem": {
+        "type": "stdio",
+        "command": "bunx",
+        "args": ["-y", "@modelcontextprotocol/server-filesystem", "/workspace"],
+        "auto_restart": true
+      }
+    }
+  }
+  ```
 
-If using Docker, the MCP server is available at the container's stdio interface. Add this to your VS Code `settings.json`:
+</details>
 
-```json
-{
-  "github.copilot.advanced": {
-    "mcp": {
-      "servers": {
-        "agent-coordinator": {
-          "command": "docker",
-          "args": ["exec", "-i", "agent-coordinator", "/app/scripts/mcp_launcher.sh"],
-          "env": {
-            "MIX_ENV": "prod"
-          }
+<details>
+<summary>Manual Setup</summary>
+
+  ### Prerequisites
+
+  - **Elixir**: 1.16+ with OTP 26+
+  - **Node.js**: 18+ (for some MCP servers)
+  - **uv**: If using python MCP servers
+
+  ### Clone the Repository
+
+  It is suggested to install Elixir (and Erlang) via [asdf](https://asdf-vm.com/) for easy version management.
+
+  NATS can be found at [nats.io](https://github.com/nats-io/nats-server/releases/latest), or via Docker
+
+  ```bash
+  git clone https://github.com/rooba/agentcoordinator.git
+  cd agentcoordinator
+  mix deps.get
+  mix compile
+  ```
+
+  ### Start the MCP Server directly
+
+  ```bash
+  # Start the MCP server directly
+  export MCP_INTERFACE_MODE=stdio # or http / websocket
+  # export MCP_HTTP_PORT=4000 # if using http mode
+
+  ./scripts/mcp_launcher.sh
+
+  # Or in development mode
+  mix run --no-halt
+  ```
+
+  ### Run via VS Code or similar tools
+
+  Add this to your workspace's `./.vscode/mcp.json` (vscode copilot) or `mcp_servers.json` depending on your tool:
+
+  ```json
+  {
+    "servers": {
+      "agent-coordinator": {
+        "command": "/path/to/agent_coordinator/scripts/mcp_launcher.sh",
+        "args": [],
+        "env": {
+          "MIX_ENV": "prod",
+          "NATS_HOST": "localhost",
+          "NATS_PORT": "4222",
+          "MCP_CONFIG_FILE": "/path/to/mcp_servers.json",
+          "PWD": "${workspaceFolder}"
         }
       }
     }
   }
-}
-```
+  ```
 
-#### For Manual Setup
-
-Add this to your VS Code `settings.json`:
-
-```json
-{
-  "github.copilot.advanced": {
-    "mcp": {
-      "servers": {
-        "agent-coordinator": {
-          "command": "/path/to/agent_coordinator/scripts/mcp_launcher.sh",
-          "args": [],
-          "env": {
-            "MIX_ENV": "dev"
-          }
-        }
-      }
-    }
-  }
-}
-  }
-}
-```
-
-### 4. Test It Works
-
-#### Docker Testing
-
-```bash
-# Test with Docker
-docker-compose exec agent-coordinator /app/bin/agent_coordinator ping
-
-# Run example (if available in container)
-docker-compose exec agent-coordinator mix run examples/full_workflow_demo.exs
-
-# View logs
-docker-compose logs -f agent-coordinator
-```
-
-#### Manual Testing
-
-```bash
-# Run the demo to see it in action
-mix run examples/full_workflow_demo.exs
-```
-
-## 🐳 Docker Usage Guide
-
-### Available Docker Commands
-
-#### Basic Operations
-
-```bash
-# Build the image
-docker build -t agent-coordinator .
-
-# Run standalone container
-docker run -d --name agent-coordinator -p 4000:4000 agent-coordinator
-
-# Run with custom config
-docker run -d \
-  -v ./mcp_servers.json:/app/mcp_servers.json:ro \
-  -p 4000:4000 \
-  agent-coordinator
-```
-
-#### Docker Compose Operations
-
-```bash
-# Start full stack
-docker-compose up -d
-
-# Start only agent coordinator
-docker-compose up -d agent-coordinator
-
-# View logs
-docker-compose logs -f agent-coordinator
-
-# Restart after config changes
-docker-compose restart agent-coordinator
-
-# Stop everything
-docker-compose down
-
-# Remove volumes (reset data)
-docker-compose down -v
-```
-
-#### Development with Docker
-
-```bash
-# Start in development mode
-docker-compose -f docker-compose.yml -f docker-compose.dev.yml up
-
-# Interactive shell for debugging
-docker-compose exec agent-coordinator bash
-
-# Run tests in container
-docker-compose exec agent-coordinator mix test
-
-# Watch logs during development
-docker-compose logs -f
-```
-
-### Environment Variables
-
-Configure the container using environment variables:
-
-```bash
-# docker-compose.override.yml example
-version: '3.8'
-services:
-  agent-coordinator:
-    environment:
-      - MIX_ENV=prod
-      - NATS_HOST=nats
-      - NATS_PORT=4222
-      - LOG_LEVEL=info
-```
-
-### Custom Configuration
-
-#### External MCP Servers
-
-Mount your own `mcp_servers.json`:
-
-```bash
-docker run -d \
-  -v ./my-mcp-config.json:/app/mcp_servers.json:ro \
-  agent-coordinator
-```
-
-#### Persistent Data
-
-```bash
-docker run -d \
-  -v agent_data:/app/data \
-  -v nats_data:/data \
-  agent-coordinator
-```
-
-### Monitoring & Health Checks
-
-#### Container Health
-
-```bash
-# Check container health
-docker-compose ps
-
-# Health check details
-docker inspect --format='{{json .State.Health}}' agent-coordinator
-
-# Manual health check
-docker-compose exec agent-coordinator /app/bin/agent_coordinator ping
-```
-
-#### NATS Monitoring
-
-Access NATS monitoring dashboard:
-```bash
-# Start with monitoring profile
-docker-compose --profile monitoring up -d
-
-# Access dashboard at http://localhost:8080
-open http://localhost:8080
-```
-
-### Troubleshooting
-
-#### Common Issues
-
-```bash
-# Check container logs
-docker-compose logs agent-coordinator
-
-# Check NATS connectivity
-docker-compose exec agent-coordinator nc -z nats 4222
-
-# Restart stuck container
-docker-compose restart agent-coordinator
-
-# Reset everything
-docker-compose down -v && docker-compose up -d
-```
-
-#### Performance Tuning
-
-```bash
-# Allocate more memory
-docker-compose up -d --scale agent-coordinator=1 \
-  --memory=1g --cpus="2.0"
-```
-
-## 🎮 How to Use
-
-Once your AI agents are connected via MCP, they can:
-
-### Register as an Agent
-
-```bash
-# An agent identifies itself with capabilities
-register_agent("GitHub Copilot", ["coding", "testing"], codebase_id: "my-project")
-```
-
-### Create Tasks
-
-```bash
-# Tasks are created with requirements
-create_task("Fix login bug", "Authentication fails on mobile",
-  priority: "high",
-  required_capabilities: ["coding", "debugging"]
-)
-```
-
-### Coordinate Automatically
-
-The coordinator automatically:
-
-- **Matches** tasks to agents based on capabilities
-- **Queues** tasks when no suitable agents are available
-- **Tracks** agent heartbeats to ensure they're still working
-- **Handles** cross-codebase tasks that span multiple repositories
-
-### Available MCP Tools
-
-All MCP-compatible AI agents get these tools automatically:
-
-| Tool | Purpose |
-|------|---------|
-| `register_agent` | Register an agent with capabilities |
-| `create_task` | Create a new task with requirements |
-| `get_next_task` | Get the next task assigned to an agent |
-| `complete_task` | Mark current task as completed |
-| `get_task_board` | View all agents and their status |
-| `heartbeat` | Send agent heartbeat to stay active |
-| `register_codebase` | Register a new codebase/repository |
-| `create_cross_codebase_task` | Create tasks spanning multiple repos |
-
-## 🧪 Development & Testing
-
-### Running Tests
-
-```bash
-# Run all tests
-mix test
-
-# Run with coverage
-mix test --cover
-
-# Try the examples
-mix run examples/full_workflow_demo.exs
-mix run examples/auto_heartbeat_demo.exs
-```
-
-### Code Quality
-
-```bash
-# Format code
-mix format
-
-# Run static analysis
-mix credo
-
-# Type checking
-mix dialyzer
-```
-
-## 📁 Project Structure
-
-```text
-agent_coordinator/
-├── lib/
-│   ├── agent_coordinator.ex           # Main module
-│   └── agent_coordinator/
-│       ├── mcp_server.ex             # MCP protocol implementation
-│       ├── task_registry.ex          # Task management
-│       ├── agent.ex                  # Agent management
-│       ├── codebase_registry.ex      # Multi-repository support
-│       └── application.ex            # Application supervisor
-├── examples/                         # Working examples
-├── test/                            # Test suite
-├── scripts/                         # Helper scripts
-└── docs/                            # Technical documentation
-    ├── README.md                    # Documentation index
-    ├── AUTO_HEARTBEAT.md            # Unified MCP server details
-    ├── VSCODE_TOOL_INTEGRATION.md   # VS Code integration
-    └── LANGUAGE_IMPLEMENTATIONS.md  # Alternative language guides
-```
-
-## 🤔 Why This Design?
-
-**The Problem**: Multiple AI agents working on the same codebase step on each other, duplicate work, or create conflicts.
-
-**The Solution**: A coordination layer that:
-
-- Lets agents register their capabilities
-- Intelligently distributes tasks
-- Tracks progress and prevents conflicts
-- Scales across multiple repositories
-
-**Why Elixir?**: Built-in concurrency, fault tolerance, and excellent for coordination systems.
-
-## 🚀 Alternative Implementations
-
-While this Elixir version works great, you might want to consider these languages for broader adoption:
-
-### Go Implementation
-
-- **Pros**: Single binary deployment, great performance, large community
-- **Cons**: More verbose concurrency patterns
-- **Best for**: Teams wanting simple deployment and good performance
-
-### Python Implementation
-
-- **Pros**: Huge ecosystem, familiar to most developers, excellent tooling
-- **Cons**: GIL limitations for true concurrency
-- **Best for**: AI/ML teams already using Python ecosystem
-
-### Rust Implementation
-
-- **Pros**: Maximum performance, memory safety, growing adoption
-- **Cons**: Steeper learning curve, smaller ecosystem
-- **Best for**: Performance-critical deployments
-
-### Node.js Implementation
-
-- **Pros**: JavaScript familiarity, event-driven nature fits coordination
-- **Cons**: Single-threaded limitations, callback complexity
-- **Best for**: Web teams already using Node.js
-
-## 🤝 Contributing
-
-Contributions are welcome! Here's how:
-
-1. Fork the repository
-2. Create your feature branch (`git checkout -b feature/amazing-feature`)
-3. Commit your changes (`git commit -m 'Add some amazing feature'`)
-4. Push to the branch (`git push origin feature/amazing-feature`)
-5. Open a Pull Request
-
-See [CONTRIBUTING.md](CONTRIBUTING.md) for detailed guidelines.
-
-## 📄 License
-
-This project is licensed under the MIT License - see the [LICENSE](LICENSE) file for details.
-
-## 🙏 Acknowledgments
-
-- [Model Context Protocol](https://modelcontextprotocol.io/) for the agent communication standard
-- [Elixir](https://elixir-lang.org/) community for the excellent ecosystem
-- AI development teams pushing the boundaries of collaborative coding
-
----
-
-**Agent Coordinator** - Making AI agents work together, not against each other.
+</details>

docker-compose.dev.yml

@@ -18,7 +18,6 @@ services:
     profiles:
       - dev
 
-  # Lightweight development NATS without persistence
   nats:
     command:
       - '--jetstream'

docker-compose.yml

@@ -1,51 +1,17 @@
 version: '3.8'
 
 services:
-  # Agent Coordinator MCP Server
-  agent-coordinator:
-    build:
-      context: .
-      dockerfile: Dockerfile
-    container_name: agent-coordinator
-    environment:
-      - MIX_ENV=prod
-      - NATS_HOST=nats
-      - NATS_PORT=4222
-    volumes:
-      # Mount local mcp_servers.json for easy configuration
-      - ./mcp_servers.json:/app/mcp_servers.json:ro
-      # Mount a directory for persistent data (optional)
-      - agent_data:/app/data
-    ports:
-      # Expose port 4000 if the app serves HTTP endpoints
-      - "4000:4000"
-    depends_on:
-      nats:
-        condition: service_healthy
-    restart: unless-stopped
-    healthcheck:
-      test: ["/app/bin/agent_coordinator", "ping"]
-      interval: 30s
-      timeout: 10s
-      retries: 3
-      start_period: 30s
-
-  # NATS Message Broker (optional but recommended for production)
   nats:
     image: nats:2.10-alpine
     container_name: agent-coordinator-nats
     command:
       - '--jetstream'
       - '--store_dir=/data'
-      - '--max_file_store=1G'
-      - '--max_mem_store=256M'
+      - '--http_port=8222'
     ports:
-      # NATS client port
-      - "4222:4222"
-      # NATS HTTP monitoring port
-      - "8222:8222"
-      # NATS routing port for clustering
-      - "6222:6222"
+      - "4223:4222"
+      - "8223:8222"
+      - "6223:6222"
     volumes:
       - nats_data:/data
     restart: unless-stopped
@@ -55,31 +21,32 @@ services:
       timeout: 5s
       retries: 3
       start_period: 10s
+    networks:
+      - agent-coordinator-network
 
-  # Optional: NATS Monitoring Dashboard
-  nats-board:
-    image: devforth/nats-board:latest
-    container_name: agent-coordinator-nats-board
+  agent-coordinator:
+    image: ghcr.io/rooba/agentcoordinator:latest
+    container_name: agent-coordinator
     environment:
-      - NATS_HOSTS=nats:4222
+      - NATS_HOST=nats
+      - NATS_PORT=4222
+      - MIX_ENV=prod
+    volumes:
+      - ./mcp_servers.json:/app/mcp_servers.json:ro
+      - ./workspace:/workspace:rw
     ports:
-      - "8080:8080"
+      - "4000:4000"
     depends_on:
       nats:
         condition: service_healthy
     restart: unless-stopped
-    profiles:
-      - monitoring
+    networks:
+      - agent-coordinator-network
 
 volumes:
-  # Persistent storage for NATS JetStream
   nats_data:
     driver: local
 
-  # Persistent storage for agent coordinator data
-  agent_data:
-    driver: local
-
 networks:
-  default:
-    name: agent-coordinator-network
+  agent-coordinator-network:
+    driver: bridge

docker-entrypoint.sh

@@ -9,13 +9,23 @@ set -e
 export MIX_ENV="${MIX_ENV:-prod}"
 export NATS_HOST="${NATS_HOST:-localhost}"
 export NATS_PORT="${NATS_PORT:-4222}"
+export DOCKERIZED="true"
+COLORIZED="${COLORIZED:-}"
 
-# Colors for output
-RED='\033[0;31m'
-GREEN='\033[0;32m'
-YELLOW='\033[1;33m'
-BLUE='\033[0;34m'
-NC='\033[0m' # No Color
+if [ ! -z "$COLORIZED" ]; then
+    # Colors for output
+    RED='\033[0;31m'
+    GREEN='\033[0;32m'
+    YELLOW='\033[1;33m'
+    BLUE='\033[0;34m'
+    NC='\033[0m' # No Color
+else
+    RED=''
+    GREEN=''
+    YELLOW=''
+    BLUE=''
+    NC=''
+fi
 
 # Logging functions
 log_info() {
@@ -30,22 +40,12 @@ log_error() {
     echo -e "${RED}[ERROR]${NC} $1" >&2
 }
 
-log_success() {
-    echo -e "${GREEN}[SUCCESS]${NC} $1" >&2
+log_debug() {
+    echo -e "${GREEN}[DEBUG]${NC} $1" >&2
 }
 
-# Cleanup function for graceful shutdown
 cleanup() {
-    log_info "Received shutdown signal, cleaning up..."
-
-    # Send termination signals to child processes
-    if [ ! -z "$MAIN_PID" ]; then
-        log_info "Stopping main process (PID: $MAIN_PID)..."
-        kill -TERM "$MAIN_PID" 2>/dev/null || true
-        wait "$MAIN_PID" 2>/dev/null || true
-    fi
-
-    log_success "Cleanup completed"
+    log_info "Received shutdown signal, shutting down..."
     exit 0
 }
 
@@ -62,7 +62,7 @@ wait_for_nats() {
 
         while [ $count -lt $timeout ]; do
             if nc -z "$NATS_HOST" "$NATS_PORT" 2>/dev/null; then
-                log_success "NATS is available"
+                log_debug "NATS is available"
                 return 0
             fi
 
@@ -88,13 +88,7 @@ validate_config() {
         exit 1
     fi
 
-    # Validate JSON
-    if ! cat /app/mcp_servers.json | bun run -e "JSON.parse(require('fs').readFileSync(0, 'utf8'))" >/dev/null 2>&1; then
-        log_error "Invalid JSON in mcp_servers.json"
-        exit 1
-    fi
-
-    log_success "Configuration validation passed"
+    log_debug "Configuration validation passed"
 }
 
 # Pre-install external MCP server dependencies
@@ -120,7 +114,7 @@ preinstall_dependencies() {
         bun add --global --silent "$package" || log_warn "Failed to cache $package"
     done
 
-    log_success "Dependencies pre-installed"
+    log_debug "Dependencies pre-installed"
 }
 
 # Main execution
@@ -129,6 +123,7 @@ main() {
     log_info "Environment: $MIX_ENV"
     log_info "NATS: $NATS_HOST:$NATS_PORT"
 
+
     # Validate configuration
     validate_config
 
@@ -147,8 +142,7 @@ main() {
     if [ "$#" -eq 0 ] || [ "$1" = "/app/scripts/mcp_launcher.sh" ]; then
         # Default: start the MCP server
         log_info "Starting MCP server via launcher script..."
-        exec "/app/scripts/mcp_launcher.sh" &
-        MAIN_PID=$!
+        exec "/app/scripts/mcp_launcher.sh"
     elif [ "$1" = "bash" ] || [ "$1" = "sh" ]; then
         # Interactive shell mode
         log_info "Starting interactive shell..."
@@ -156,21 +150,10 @@ main() {
     elif [ "$1" = "release" ]; then
         # Direct release mode
         log_info "Starting via Elixir release..."
-        exec "/app/bin/agent_coordinator" "start" &
-        MAIN_PID=$!
+        exec "/app/bin/agent_coordinator" "start"
     else
-        # Custom command
-        log_info "Starting custom command: $*"
-        exec "$@" &
-        MAIN_PID=$!
-    fi
-
-    # Wait for the main process if it's running in background
-    if [ ! -z "$MAIN_PID" ]; then
-        log_success "Main process started (PID: $MAIN_PID)"
-        wait "$MAIN_PID"
+        exit 0
     fi
 }
 
-# Execute main function with all arguments
 main "$@"

docs/AUTO_HEARTBEAT.md

@@ -1,333 +0,0 @@
-# Unified MCP Server with Auto-Heartbeat System Documentation
-
-## Overview
-
-The Agent Coordinator now operates as a **unified MCP server** that internally manages all external MCP servers (Context7, Figma, Filesystem, Firebase, Memory, Sequential Thinking, etc.) while providing automatic task tracking and heartbeat coverage for every tool operation. GitHub Copilot sees only a single MCP server, but gets access to all tools with automatic coordination.
-
-## Key Features
-
-### 1. Unified MCP Server Architecture
-- **Single interface**: GitHub Copilot connects to only the Agent Coordinator
-- **Internal server management**: Automatically starts and manages all external MCP servers
-- **Unified tool registry**: Aggregates tools from all servers into one comprehensive list
-- **Automatic task tracking**: Every tool call automatically creates/updates agent tasks
-
-### 2. Automatic Task Tracking
-- **Transparent operation**: Any tool usage automatically becomes a tracked task
-- **No explicit coordination needed**: Agents don't need to call `create_task` manually
-- **Real-time activity monitoring**: See what each agent is working on in real-time
-- **Smart task titles**: Automatically generated based on tool usage and context
-
-### 3. Enhanced Heartbeat Coverage
-- **Universal coverage**: Every tool call from any server includes heartbeat management
-- **Agent session tracking**: Automatic agent registration for GitHub Copilot
-- **Activity-based heartbeats**: Heartbeats sent before/after each tool operation
-- **Session metadata**: Enhanced task board shows real activity and tool usage
-
-## Architecture
-
-```
-GitHub Copilot
-      ↓
-Agent Coordinator (Single Visible MCP Server)
-      ↓
-┌─────────────────────────────────────────────────────────┐
-│  Unified MCP Server                                     │
-│  • Aggregates all tools into single interface          │
-│  • Automatic task tracking for every operation         │
-│  • Agent coordination tools (create_task, etc.)        │
-│  • Universal heartbeat coverage                        │
-└─────────────────────────────────────────────────────────┘
-      ↓
-┌─────────────────────────────────────────────────────────┐
-│  MCP Server Manager                                     │
-│  • Starts & manages external servers internally        │
-│  • Health monitoring & auto-restart                    │
-│  • Tool aggregation & routing                          │
-│  • Auto-task creation for any tool usage               │
-└─────────────────────────────────────────────────────────┘
-      ↓
-┌──────────┬──────────┬───────────┬──────────┬─────────────┐
-│ Context7 │  Figma   │Filesystem │ Firebase │ Memory +    │
-│ Server   │ Server   │ Server    │ Server   │ Sequential  │
-└──────────┴──────────┴───────────┴──────────┴─────────────┘
-```
-
-## Usage
-
-### GitHub Copilot Experience
-
-From GitHub Copilot's perspective, there's only one MCP server with all tools available:
-
-```javascript
-// All these tools are available from the single Agent Coordinator server:
-
-// Agent coordination tools
-register_agent, create_task, get_next_task, complete_task, get_task_board, heartbeat
-
-// Context7 tools
-mcp_context7_get-library-docs, mcp_context7_resolve-library-id
-
-// Figma tools
-mcp_figma_get_code, mcp_figma_get_image, mcp_figma_get_variable_defs
-
-// Filesystem tools
-mcp_filesystem_read_file, mcp_filesystem_write_file, mcp_filesystem_list_directory
-
-// Firebase tools
-mcp_firebase_firestore_get_documents, mcp_firebase_auth_get_user
-
-// Memory tools
-mcp_memory_search_nodes, mcp_memory_create_entities
-
-// Sequential thinking tools
-mcp_sequentialthi_sequentialthinking
-
-// Plus any other configured MCP servers...
-```
-
-### Automatic Task Tracking
-
-Every tool usage automatically creates or updates an agent's current task:
-
-```elixir
-# When GitHub Copilot calls any tool, it automatically:
-# 1. Sends pre-operation heartbeat
-# 2. Creates/updates current task based on tool usage
-# 3. Routes to appropriate external server
-# 4. Sends post-operation heartbeat
-# 5. Updates task activity log
-
-# Example: Reading a file automatically creates a task
-Tool Call: mcp_filesystem_read_file(%{"path" => "/project/src/main.rs"})
-Auto-Created Task: "Reading file: main.rs"
-Description: "Reading and analyzing file content from /project/src/main.rs"
-
-# Example: Figma code generation automatically creates a task
-Tool Call: mcp_figma_get_code(%{"nodeId" => "123:456"})
-Auto-Created Task: "Generating Figma code: 123:456"
-Description: "Generating code for Figma component 123:456"
-
-# Example: Library research automatically creates a task
-Tool Call: mcp_context7_get-library-docs(%{"context7CompatibleLibraryID" => "/vercel/next.js"})
-Auto-Created Task: "Researching: /vercel/next.js"
-Description: "Researching documentation for /vercel/next.js library"
-```
-
-### Task Board with Real Activity
-
-```elixir
-# Get enhanced task board showing real agent activity
-{:ok, board} = get_task_board()
-
-# Returns:
-%{
-  agents: [
-    %{
-      agent_id: "github_copilot_session",
-      name: "GitHub Copilot",
-      status: :working,
-      current_task: %{
-        title: "Reading file: database.ex",
-        description: "Reading and analyzing file content from /project/lib/database.ex",
-        auto_generated: true,
-        tool_name: "mcp_filesystem_read_file",
-        created_at: ~U[2025-08-23 10:30:00Z]
-      },
-      last_heartbeat: ~U[2025-08-23 10:30:05Z],
-      online: true
-    }
-  ],
-  pending_tasks: [],
-  total_agents: 1,
-  active_tasks: 1,
-  pending_count: 0
-}
-```
-
-## Configuration
-
-### MCP Server Configuration
-
-External servers are configured in `mcp_servers.json`:
-
-```json
-{
-  "servers": {
-    "mcp_context7": {
-      "type": "stdio",
-      "command": "uvx",
-      "args": ["mcp-server-context7"],
-      "auto_restart": true,
-      "description": "Context7 library documentation server"
-    },
-    "mcp_figma": {
-      "type": "stdio",
-      "command": "npx",
-      "args": ["-y", "@figma/mcp-server-figma"],
-      "auto_restart": true,
-      "description": "Figma design integration server"
-    },
-    "mcp_filesystem": {
-      "type": "stdio",
-      "command": "npx",
-      "args": ["-y", "@modelcontextprotocol/server-filesystem", "/home/ra"],
-      "auto_restart": true,
-      "description": "Filesystem operations with auto-task tracking"
-    }
-  },
-  "config": {
-    "startup_timeout": 30000,
-    "heartbeat_interval": 10000,
-    "auto_restart_delay": 1000,
-    "max_restart_attempts": 3
-  }
-}
-```
-
-### VS Code Settings
-
-Update your VS Code MCP settings to point to the unified server:
-
-```json
-{
-  "mcp.servers": {
-    "agent-coordinator": {
-      "command": "/home/ra/agent_coordinator/scripts/mcp_launcher.sh",
-      "args": []
-    }
-  }
-}
-```
-
-## Benefits
-
-### 1. Simplified Configuration
-- **One server**: GitHub Copilot only needs to connect to Agent Coordinator
-- **No manual setup**: External servers are managed automatically
-- **Unified tools**: All tools appear in one comprehensive list
-
-### 2. Automatic Coordination
-- **Zero-effort tracking**: Every tool usage automatically tracked as tasks
-- **Real-time visibility**: See exactly what agents are working on
-- **Smart task creation**: Descriptive task titles based on actual tool usage
-- **Universal heartbeats**: Every operation maintains agent liveness
-
-### 3. Enhanced Collaboration
-- **Agent communication**: Coordination tools still available for planning
-- **Multi-agent workflows**: Agents can create tasks for each other
-- **Activity awareness**: Agents can see what others are working on
-- **File conflict prevention**: Automatic file locking across operations
-
-### 4. Operational Excellence
-- **Auto-restart**: Failed external servers automatically restarted
-- **Health monitoring**: Real-time status of all managed servers
-- **Error handling**: Graceful degradation when servers unavailable
-- **Performance**: Direct routing without external proxy overhead
-
-## Migration Guide
-
-### From Individual MCP Servers
-
-**Before:**
-```json
-// VS Code settings with multiple servers
-{
-  "mcp.servers": {
-    "context7": {"command": "uvx", "args": ["mcp-server-context7"]},
-    "figma": {"command": "npx", "args": ["-y", "@figma/mcp-server-figma"]},
-    "filesystem": {"command": "npx", "args": ["-y", "@modelcontextprotocol/server-filesystem", "/path"]},
-    "agent-coordinator": {"command": "/path/to/mcp_launcher.sh"}
-  }
-}
-```
-
-**After:**
-```json
-// VS Code settings with single unified server
-{
-  "mcp.servers": {
-    "agent-coordinator": {
-      "command": "/home/ra/agent_coordinator/scripts/mcp_launcher.sh",
-      "args": []
-    }
-  }
-}
-```
-
-### Configuration Migration
-
-1. **Remove individual MCP servers** from VS Code settings
-2. **Add external servers** to `mcp_servers.json` configuration
-3. **Update launcher script** path if needed
-4. **Restart VS Code** to apply changes
-
-## Startup and Testing
-
-### Starting the Unified Server
-
-```bash
-# From the project directory
-./scripts/mcp_launcher.sh
-```
-
-### Testing Tool Aggregation
-
-```bash
-# Test that all tools are available
-echo '{"jsonrpc":"2.0","id":1,"method":"tools/list"}' | ./scripts/mcp_launcher.sh
-
-# Should return tools from Agent Coordinator + all external servers
-```
-
-### Testing Automatic Task Tracking
-
-```bash
-# Use any tool - it should automatically create a task
-echo '{"jsonrpc":"2.0","id":2,"method":"tools/call","params":{"name":"mcp_filesystem_read_file","arguments":{"path":"/home/ra/test.txt"}}}' | ./scripts/mcp_launcher.sh
-
-# Check task board to see auto-created task
-echo '{"jsonrpc":"2.0","id":3,"method":"tools/call","params":{"name":"get_task_board","arguments":{}}}' | ./scripts/mcp_launcher.sh
-```
-
-## Troubleshooting
-
-### External Server Issues
-
-1. **Server won't start**
-   - Check command path in `mcp_servers.json`
-   - Verify dependencies are installed (`npm install -g @modelcontextprotocol/server-*`)
-   - Check logs for startup errors
-
-2. **Tools not appearing**
-   - Verify server started successfully
-   - Check server health: use `get_server_status` tool
-   - Restart specific servers if needed
-
-3. **Auto-restart not working**
-   - Check `auto_restart: true` in server config
-   - Verify process monitoring is active
-   - Check restart attempt limits
-
-### Task Tracking Issues
-
-1. **Tasks not auto-creating**
-   - Verify agent session is active
-   - Check that GitHub Copilot is registered as agent
-   - Ensure heartbeat system is working
-
-2. **Incorrect task titles**
-   - Task titles are generated based on tool name and arguments
-   - Can be customized in `generate_task_title/2` function
-   - File-based operations use file paths in titles
-
-## Future Enhancements
-
-Planned improvements:
-
-1. **Dynamic server discovery** - Auto-detect and add new MCP servers
-2. **Load balancing** - Distribute tool calls across multiple server instances
-3. **Tool versioning** - Support multiple versions of the same tool
-4. **Custom task templates** - Configurable task generation based on tool patterns
-5. **Inter-agent messaging** - Direct communication channels between agents
-6. **Workflow orchestration** - Multi-step task coordination across agents

docs/DYNAMIC_TOOL_DISCOVERY.md

@@ -1,107 +0,0 @@
-# Dynamic Tool Discovery Implementation Summary
-
-## What We Accomplished
-
-The Agent Coordinator has been successfully refactored to implement **fully dynamic tool discovery** following the MCP protocol specification, eliminating all hardcoded tool lists **and ensuring shared MCP server instances across all agents**.
-
-## Key Changes Made
-
-### 1. Removed Hardcoded Tool Lists
-**Before**:
-```elixir
-coordinator_native = ~w[register_agent create_task get_next_task complete_task get_task_board heartbeat]
-```
-
-**After**:
-```elixir
-# Tools discovered dynamically by checking actual tool definitions
-coordinator_tools = get_coordinator_tools()
-if Enum.any?(coordinator_tools, fn tool -> tool["name"] == tool_name end) do
-  {:coordinator, tool_name}
-end
-```
-
-### 2. Made VS Code Tools Conditional
-**Before**: Always included VS Code tools even if not available
-
-**After**:
-```elixir
-vscode_tools = try do
-  if Code.ensure_loaded?(AgentCoordinator.VSCodeToolProvider) do
-    AgentCoordinator.VSCodeToolProvider.get_tools()
-  else
-    []
-  end
-rescue
-  _ -> []
-end
-```
-
-### 3. Added Shared MCP Server Management
-**MAJOR FIX**: MCPServerManager is now part of the application supervision tree
-
-**Before**: Each agent/test started its own MCP servers
-- Multiple server instances for the same functionality
-- Resource waste and potential conflicts
-- Different OS PIDs per agent
-
-**After**: Single shared MCP server instance
-- Added to `application.ex` supervision tree
-- All agents use the same MCP server processes
-- Perfect resource sharing
-
-### 4. Added Dynamic Tool Refresh
-**New function**: `refresh_tools/0`
-- Re-discovers tools from all running MCP servers
-- Updates tool registry in real-time
-- Handles both PID and Port server types properly
-
-### 5. Enhanced Tool Routing
-**Before**: Used hardcoded tool name lists for routing decisions
-
-**After**: Checks actual tool definitions to determine routing## Test Results
-
-✅ All tests passing with dynamic discovery:
-```
-Found 44 total tools:
-• Coordinator tools: 6
-• External MCP tools: 26+ (context7, filesystem, memory, sequential thinking)
-• VS Code tools: 12 (when available)
-```
-
-**External servers discovered**:
-- Context7: 2 tools (resolve-library-id, get-library-docs)
-- Filesystem: 14 tools (read_file, write_file, edit_file, etc.)
-- Memory: 9 tools (search_nodes, create_entities, etc.)
-- Sequential Thinking: 1 tool (sequentialthinking)
-
-## Benefits Achieved
-
-1. **Perfect MCP Protocol Compliance**: No hardcoded assumptions, everything discovered via `tools/list`
-2. **Shared Server Architecture**: Single MCP server instance shared by all agents (massive resource savings)
-3. **Flexibility**: New MCP servers can be added via configuration without code changes
-4. **Reliability**: Tools automatically re-discovered when servers restart
-5. **Performance**: Only available tools included in routing decisions + shared server processes
-6. **Maintainability**: No need to manually sync tool lists with server implementations
-7. **Resource Efficiency**: No duplicate server processes per agent/session
-8. **Debugging**: Clear visibility into which tools are available from which servers
-
-## Files Modified
-
-1. **`lib/agent_coordinator/mcp_server_manager.ex`**:
-   - Removed `get_coordinator_tool_names/0` function
-   - Modified `find_tool_server/2` to use dynamic discovery
-   - Added conditional VS Code tool loading
-   - Added `refresh_tools/0` and `rediscover_all_tools/1`
-   - Fixed Port vs PID handling for server aliveness checks
-
-2. **Tests**:
-   - Added `test/dynamic_tool_discovery_test.exs`
-   - All existing tests still pass
-   - New tests verify dynamic discovery works correctly
-
-## Impact
-
-This refactoring makes the Agent Coordinator a true MCP-compliant aggregation server that follows the protocol specification exactly, rather than making assumptions about what tools servers provide. It's now much more flexible and maintainable while being more reliable in dynamic environments where servers may come and go.
-
-The system now perfectly implements the user's original request: **"all tools will reply with what tools are available"** via the MCP protocol's `tools/list` method.

docs/PROJECT_CLEANUP_SUMMARY.md

@@ -1,121 +0,0 @@
-# Agent Coordinator - Project Cleanup Summary
-
-## 🎯 Mission Accomplished
-
-The Agent Coordinator project has been successfully tidied up and made much more presentable for GitHub! Here's what was accomplished:
-
-## ✅ Completed Tasks
-
-### 1. **Updated README.md** ✨
-- **Before**: Outdated README that didn't accurately describe the project
-- **After**: Comprehensive, clear README that properly explains:
-  - What Agent Coordinator actually does (MCP server for multi-agent coordination)
-  - Key features and benefits
-  - Quick start guide with practical examples
-  - Clear architecture diagram
-  - Proper project structure documentation
-  - Alternative language implementation recommendations
-
-### 2. **Cleaned Up Outdated Files** 🗑️
-- **Removed**: `test_enhanced.exs`, `test_multi_codebase.exs`, `test_timeout_fix.exs`
-- **Removed**: `README_old.md` (outdated version)
-- **Removed**: Development artifacts (`erl_crash.dump`, `firebase-debug.log`)
-- **Updated**: `.gitignore` to prevent future development artifacts
-
-### 3. **Organized Documentation Structure** 📚
-- **Created**: `docs/` directory for technical documentation
-- **Moved**: Technical deep-dive documents to `docs/`
-  - `AUTO_HEARTBEAT.md` - Unified MCP server architecture
-  - `VSCODE_TOOL_INTEGRATION.md` - VS Code integration details
-  - `SEARCH_FILES_TIMEOUT_FIX.md` - Technical timeout solutions
-  - `DYNAMIC_TOOL_DISCOVERY.md` - Dynamic tool discovery system
-- **Created**: `docs/README.md` - Documentation index and navigation
-- **Result**: Clean root directory with organized technical docs
-
-### 4. **Improved Project Structure** 🏗️
-- **Updated**: Main `AgentCoordinator` module to reflect actual functionality
-- **Before**: Just a placeholder "hello world" function
-- **After**: Comprehensive module with:
-  - Proper documentation explaining the system
-  - Practical API functions (`register_agent`, `create_task`, `get_task_board`)
-  - Version and status information
-  - Real examples and usage patterns
-
-### 5. **Created Language Implementation Guide** 🚀
-- **New Document**: `docs/LANGUAGE_IMPLEMENTATIONS.md`
-- **Comprehensive guide** for implementing Agent Coordinator in more accessible languages:
-  - **Go** (highest priority) - Single binary deployment, excellent concurrency
-  - **Python** (second priority) - Huge AI/ML community, familiar ecosystem
-  - **Rust** (third priority) - Maximum performance, memory safety
-  - **Node.js** (fourth priority) - Event-driven, web developer familiarity
-- **Detailed implementation strategies** with code examples
-- **Migration guides** for moving from Elixir to other languages
-- **Performance comparisons** and adoption recommendations
-
-## 🎨 Project Before vs After
-
-### Before Cleanup
-- ❌ Confusing README that didn't explain the actual purpose
-- ❌ Development artifacts scattered in root directory
-- ❌ Technical documentation mixed with main docs
-- ❌ Main module was just a placeholder
-- ❌ No guidance for developers wanting to use other languages
-
-### After Cleanup
-- ✅ Clear, comprehensive README explaining the MCP coordination system
-- ✅ Clean root directory with organized structure
-- ✅ Technical docs properly organized in `docs/` directory
-- ✅ Main module reflects actual project functionality
-- ✅ Detailed guides for implementing in Go, Python, Rust, Node.js
-- ✅ Professional presentation suitable for open source
-
-## 🌟 Key Improvements for GitHub Presentation
-
-1. **Clear Value Proposition**: README immediately explains what the project does and why it's valuable
-2. **Easy Getting Started**: Quick start section gets users running in minutes
-3. **Professional Structure**: Well-organized directories and documentation
-4. **Multiple Language Options**: Guidance for teams that prefer Go, Python, Rust, or Node.js
-5. **Technical Deep-Dives**: Detailed docs for developers who want to understand the internals
-6. **Real Examples**: Working code examples and practical usage patterns
-
-## 🚀 Recommendations for Broader Adoption
-
-Based on the cleanup analysis, here are the top recommendations:
-
-### 1. **Implement Go Version First** (Highest Impact)
-- **Why**: Single binary deployment, familiar to most developers, excellent performance
-- **Effort**: 2-3 weeks development time
-- **Impact**: Would significantly increase adoption
-
-### 2. **Python Version Second** (AI/ML Community)
-- **Why**: Huge ecosystem in AI space, very familiar to ML engineers
-- **Effort**: 3-4 weeks development time
-- **Impact**: Perfect for AI agent development teams
-
-### 3. **Create Video Demos**
-- **What**: Screen recordings showing agent coordination in action
-- **Why**: Much easier to understand the value than reading docs
-- **Effort**: 1-2 days
-- **Impact**: Increases GitHub star rate and adoption
-
-### 4. **Docker Compose Quick Start**
-- **What**: Single `docker-compose up` command to get everything running
-- **Why**: Eliminates setup friction for trying the project
-- **Effort**: 1 day
-- **Impact**: Lower barrier to entry
-
-## 🎯 Current State
-
-The Agent Coordinator project is now:
-
-- ✅ **Professional**: Clean, well-organized, and properly documented
-- ✅ **Accessible**: Clear explanations for what it does and how to use it
-- ✅ **Extensible**: Guidance for implementing in other languages
-- ✅ **Developer-Friendly**: Good project structure and documentation organization
-- ✅ **GitHub-Ready**: Perfect for open source presentation and community adoption
-
-The Elixir implementation remains the reference implementation with all advanced features, while the documentation now provides clear paths for teams to implement the same concepts in their preferred languages.
-
----
-
-**Result**: The Agent Coordinator project is now much more approachable and ready for the world to enjoy! 🌍

docs/README.md

@@ -1,77 +0,0 @@
-# Agent Coordinator Documentation
-
-This directory contains detailed technical documentation for the Agent Coordinator project.
-
-## 📚 Documentation Index
-
-### Core Documentation
-- [Main README](../README.md) - Project overview, setup, and basic usage
-- [CHANGELOG](../CHANGELOG.md) - Version history and changes
-- [CONTRIBUTING](../CONTRIBUTING.md) - How to contribute to the project
-
-### Technical Deep Dives
-
-#### Architecture & Design
-- [AUTO_HEARTBEAT.md](AUTO_HEARTBEAT.md) - Unified MCP server with automatic task tracking and heartbeat system
-- [VSCODE_TOOL_INTEGRATION.md](VSCODE_TOOL_INTEGRATION.md) - VS Code tool integration and dynamic tool discovery
-- [DYNAMIC_TOOL_DISCOVERY.md](DYNAMIC_TOOL_DISCOVERY.md) - How the system dynamically discovers and manages MCP tools
-
-#### Implementation Details
-- [SEARCH_FILES_TIMEOUT_FIX.md](SEARCH_FILES_TIMEOUT_FIX.md) - Technical details on timeout handling and GenServer call optimization
-
-## 🎯 Key Concepts
-
-### Agent Coordination
-The Agent Coordinator is an MCP server that enables multiple AI agents to work together without conflicts by:
-
-- **Task Distribution**: Automatically assigns tasks based on agent capabilities
-- **Heartbeat Management**: Tracks agent liveness and activity
-- **Cross-Codebase Support**: Coordinates work across multiple repositories
-- **Tool Unification**: Provides a single interface to multiple external MCP servers
-
-### Unified MCP Server
-The system acts as a unified MCP server that internally manages external MCP servers while providing:
-
-- **Automatic Task Tracking**: Every tool usage becomes a tracked task
-- **Universal Heartbeat Coverage**: All operations maintain agent liveness
-- **Dynamic Tool Discovery**: Automatically discovers tools from external servers
-- **Seamless Integration**: Single interface for all MCP-compatible tools
-
-### VS Code Integration
-Advanced integration with VS Code through:
-
-- **Native Tool Provider**: Direct access to VS Code Extension API
-- **Permission System**: Granular security controls for VS Code operations
-- **Multi-Agent Support**: Safe concurrent access to VS Code features
-- **Workflow Integration**: VS Code tools participate in task coordination
-
-## 🚀 Getting Started with Documentation
-
-1. **New Users**: Start with the [Main README](../README.md)
-2. **Developers**: Read [CONTRIBUTING](../CONTRIBUTING.md) and [AUTO_HEARTBEAT.md](AUTO_HEARTBEAT.md)
-3. **VS Code Users**: Check out [VSCODE_TOOL_INTEGRATION.md](VSCODE_TOOL_INTEGRATION.md)
-4. **Troubleshooting**: See [SEARCH_FILES_TIMEOUT_FIX.md](SEARCH_FILES_TIMEOUT_FIX.md) for common issues
-
-## 📖 Documentation Standards
-
-All documentation in this project follows these standards:
-
-- **Clear Structure**: Hierarchical headings with descriptive titles
-- **Code Examples**: Practical examples with expected outputs
-- **Troubleshooting**: Common issues and their solutions
-- **Implementation Details**: Technical specifics for developers
-- **User Perspective**: Both end-user and developer viewpoints
-
-## 🤝 Contributing to Documentation
-
-When adding new documentation:
-
-1. Place technical deep-dives in this `docs/` directory
-2. Update this index file to reference new documents
-3. Keep the main README focused on getting started
-4. Include practical examples and troubleshooting sections
-5. Use clear, descriptive headings and consistent formatting
-
----
-
-📝 **Last Updated**: August 25, 2025

docs/SEARCH_FILES_TIMEOUT_FIX.md

@@ -1,89 +0,0 @@
-# Search Files Timeout Fix
-
-## Problem Description
-
-The `search_files` tool (from the filesystem MCP server) was causing the agent-coordinator to exit with code 1 due to timeout issues. The error showed:
-
-```
-** (EXIT from #PID<0.95.0>) exited in: GenServer.call(AgentCoordinator.UnifiedMCPServer, {:handle_request, ...}, 5000)
-** (EXIT) time out
-```
-
-## Root Cause Analysis
-
-The issue was a timeout mismatch in the GenServer call chain:
-
-1. **External tool calls** (like `search_files`) can take longer than 5 seconds to complete
-2. **TaskRegistry and Inbox modules** were using default 5-second GenServer timeouts
-3. During tool execution, **heartbeat operations** are called via `TaskRegistry.heartbeat_agent/1`
-4. When the external tool took longer than 5 seconds, the heartbeat call would timeout
-5. This caused the entire tool call to fail with exit code 1
-
-## Call Chain Analysis
-
-```
-External MCP Tool Call (search_files)
-  ↓
-UnifiedMCPServer.handle_mcp_request (60s timeout) ✓
-  ↓
-MCPServerManager.route_tool_call (60s timeout) ✓
-  ↓
-call_external_tool
-  ↓
-TaskRegistry.heartbeat_agent (5s timeout) ❌ ← TIMEOUT HERE
-```
-
-## Solution Applied
-
-Updated GenServer call timeouts in the following modules:
-
-### TaskRegistry Module
-- `register_agent/1`: 5s → 30s
-- `heartbeat_agent/1`: 5s → 30s  ← **Most Critical Fix**
-- `update_task_activity/3`: 5s → 30s
-- `assign_task/1`: 5s → 30s
-- `create_task/3`: 5s → 30s
-- `complete_task/1`: 5s → 30s
-- `get_agent_current_task/1`: 5s → 15s
-
-### Inbox Module
-- `add_task/2`: 5s → 30s
-- `complete_current_task/1`: 5s → 30s
-- `get_next_task/1`: 5s → 15s
-- `get_status/1`: 5s → 15s
-- `list_tasks/1`: 5s → 15s
-- `get_current_task/1`: 5s → 15s
-
-## Timeout Strategy
-
-- **Long operations** (registration, task creation, heartbeat): **30 seconds**
-- **Read operations** (status, get tasks, list): **15 seconds**
-- **External tool routing**: **60 seconds** (already correct)
-
-## Impact
-
-This fix ensures that:
-
-1. ✅ `search_files` and other long-running external tools won't cause timeouts
-2. ✅ Agent heartbeat operations can complete successfully during tool execution
-3. ✅ The agent-coordinator won't exit with code 1 due to timeout issues
-4. ✅ All automatic task tracking continues to work properly
-
-## Files Modified
-
-- `/lib/agent_coordinator/task_registry.ex` - Updated GenServer call timeouts
-- `/lib/agent_coordinator/inbox.ex` - Updated GenServer call timeouts
-
-## Verification
-
-The fix can be verified by:
-
-1. Running the agent-coordinator with external MCP servers
-2. Executing `search_files` or other filesystem tools on large directories
-3. Confirming no timeout errors occur and exit code remains 0
-
-## Future Considerations
-
-- Consider making timeouts configurable via application config
-- Monitor for any other GenServer calls that might need timeout adjustments
-- Add timeout logging to help identify future timeout issues

docs/VSCODE_TOOL_INTEGRATION.md

@@ -1,441 +0,0 @@
-# VS Code Tool Integration with Agent Coordinator
-
-## 🎉 Latest Update: Dynamic Tool Discovery (COMPLETED)
-
-**Date**: August 23, 2025
-**Status**: ✅ **COMPLETED** - Full dynamic tool discovery implementation
-
-### What Changed
-The Agent Coordinator has been refactored to eliminate all hardcoded tool lists and implement **fully dynamic tool discovery** following the MCP protocol specification.
-
-**Key Improvements**:
-- ✅ **No hardcoded tools**: All external server tools discovered via MCP `tools/list`
-- ✅ **Conditional VS Code tools**: Only included when VS Code functionality is available
-- ✅ **Real-time refresh**: `refresh_tools()` function to rediscover tools on demand
-- ✅ **Perfect MCP compliance**: Follows protocol specification exactly
-- ✅ **Better error handling**: Proper handling of both PIDs and Ports for server monitoring
-
-**Example Tool Discovery Results**:
-```
-Found 44 total tools:
-• Coordinator tools: 6 (register_agent, create_task, etc.)
-• External MCP tools: 26+ (context7, filesystem, memory, sequential thinking)
-• VS Code tools: 12 (when available)
-```
-
-### Benefits
-1. **MCP Protocol Compliance**: Perfect adherence to MCP specification
-2. **Flexibility**: New MCP servers can be added without code changes
-3. **Reliability**: Tools automatically discovered when servers restart
-4. **Performance**: Only available tools are included in routing
-5. **Debugging**: Clear visibility into which tools are available
-
----
-
-## Overview
-
-This document outlines the implementation of VS Code's built-in tools as MCP (Model Context Protocol) tools within the Agent Coordinator system. This integration allows agents to access VS Code's native capabilities alongside external MCP servers through a unified coordination interface.
-
-## Architecture
-
-### Current State
-- Agent Coordinator acts as a unified MCP server
-- Proxies tools from external MCP servers (Context7, filesystem, memory, sequential thinking, etc.)
-- Manages task coordination, agent assignment, and cross-codebase workflows
-
-### Proposed Enhancement
-- Add VS Code Extension API tools as native MCP tools
-- Integrate with existing tool routing and coordination system
-- Maintain security and permission controls
-
-## Implementation Plan
-
-### Phase 1: Core VS Code Tool Provider
-
-#### 1.1 Create VSCodeToolProvider Module
-**File**: `lib/agent_coordinator/vscode_tool_provider.ex`
-
-**Core Tools to Implement**:
-- `vscode_read_file` - Read file contents using VS Code API
-- `vscode_write_file` - Write file contents
-- `vscode_create_file` - Create new files
-- `vscode_delete_file` - Delete files
-- `vscode_list_directory` - List directory contents
-- `vscode_get_workspace_folders` - Get workspace information
-- `vscode_run_command` - Execute VS Code commands
-- `vscode_get_active_editor` - Get current editor state
-- `vscode_set_editor_content` - Modify editor content
-- `vscode_get_selection` - Get current text selection
-- `vscode_set_selection` - Set text selection
-- `vscode_show_message` - Display messages to user
-
-#### 1.2 Tool Definitions
-Each tool will have:
-- MCP-compliant schema definition
-- Input validation
-- Error handling
-- Audit logging
-- Permission checking
-
-### Phase 2: Advanced Editor Operations
-
-#### 2.1 Language Services Integration
-- `vscode_get_diagnostics` - Get language server diagnostics
-- `vscode_format_document` - Format current document
-- `vscode_format_selection` - Format selected text
-- `vscode_find_references` - Find symbol references
-- `vscode_go_to_definition` - Navigate to definition
-- `vscode_rename_symbol` - Rename symbols
-- `vscode_code_actions` - Get available code actions
-
-#### 2.2 Search and Navigation
-- `vscode_find_in_files` - Search across workspace
-- `vscode_find_symbols` - Find symbols in workspace
-- `vscode_goto_line` - Navigate to specific line
-- `vscode_reveal_in_explorer` - Show file in explorer
-
-### Phase 3: Terminal and Process Management
-
-#### 3.1 Terminal Operations
-- `vscode_create_terminal` - Create new terminal
-- `vscode_send_to_terminal` - Send commands to terminal
-- `vscode_get_terminal_output` - Get terminal output (if possible)
-- `vscode_close_terminal` - Close terminal instances
-
-#### 3.2 Task and Process Management
-- `vscode_run_task` - Execute VS Code tasks
-- `vscode_get_tasks` - List available tasks
-- `vscode_debug_start` - Start debugging session
-- `vscode_debug_stop` - Stop debugging
-
-### Phase 4: Git and Version Control
-
-#### 4.1 Git Operations
-- `vscode_git_status` - Get git status
-- `vscode_git_commit` - Create commits
-- `vscode_git_push` - Push changes
-- `vscode_git_pull` - Pull changes
-- `vscode_git_branch` - Branch operations
-- `vscode_git_diff` - Get file differences
-
-### Phase 5: Extension and Settings Management
-
-#### 5.1 Configuration
-- `vscode_get_settings` - Get VS Code settings
-- `vscode_update_settings` - Update settings
-- `vscode_get_extensions` - List installed extensions
-- `vscode_install_extension` - Install extensions (if permitted)
-
-## Security and Safety
-
-### Permission Model
-```elixir
-defmodule AgentCoordinator.VSCodePermissions do
-  @moduledoc """
-  Manages permissions for VS Code tool access.
-  """
-
-  # Permission levels:
-  # :read_only - File reading, workspace inspection
-  # :editor - Text editing, selections
-  # :filesystem - File creation/deletion
-  # :terminal - Terminal access
-  # :git - Version control operations
-  # :admin - Settings, extensions, system commands
-end
-```
-
-### Sandboxing
-- Restrict file operations to workspace folders only
-- Prevent access to system files outside workspace
-- Rate limiting for expensive operations
-- Command whitelist for `vscode_run_command`
-
-### Audit Logging
-- Log all VS Code tool calls with:
-  - Timestamp
-  - Agent ID
-  - Tool name and parameters
-  - Result summary
-  - Permission level used
-
-## Integration Points
-
-### 1. UnifiedMCPServer Enhancement
-**File**: `lib/agent_coordinator/unified_mcp_server.ex`
-
-Add VS Code tools to the tool discovery and routing:
-
-```elixir
-defp get_all_tools(state) do
-  # Existing external MCP server tools
-  external_tools = get_external_tools(state)
-
-  # New VS Code tools
-  vscode_tools = VSCodeToolProvider.get_tools()
-
-  external_tools ++ vscode_tools
-end
-
-defp route_tool_call(tool_name, args, context, state) do
-  case tool_name do
-    "vscode_" <> _rest ->
-      VSCodeToolProvider.handle_tool_call(tool_name, args, context)
-    _ ->
-      # Route to external MCP servers
-      route_to_external_server(tool_name, args, context, state)
-  end
-end
-```
-
-### 2. Task Coordination
-VS Code tools will participate in the same task coordination system:
-- Task creation and assignment
-- File locking (prevent conflicts)
-- Cross-agent coordination
-- Priority management
-
-### 3. Agent Capabilities
-Agents can declare VS Code tool capabilities:
-```elixir
-capabilities: [
-  "coding",
-  "analysis",
-  "vscode_editing",
-  "vscode_terminal",
-  "vscode_git"
-]
-```
-
-## Usage Examples
-
-### Example 1: File Analysis and Editing
-```json
-{
-  "tool": "vscode_read_file",
-  "args": {"path": "src/main.rs"}
-}
-// Agent reads file, analyzes it
-
-{
-  "tool": "vscode_get_diagnostics",
-  "args": {"file": "src/main.rs"}
-}
-// Agent gets compiler errors
-
-{
-  "tool": "vscode_set_editor_content",
-  "args": {
-    "file": "src/main.rs",
-    "content": "// Fixed code here",
-    "range": {"start": 10, "end": 15}
-  }
-}
-// Agent fixes the issues
-```
-
-### Example 2: Cross-Tool Workflow
-```json
-// 1. Agent searches documentation using Context7
-{"tool": "mcp_context7_get-library-docs", "args": {"libraryID": "/rust/std"}}
-
-// 2. Agent analyzes current code using VS Code
-{"tool": "vscode_get_active_editor", "args": {}}
-
-// 3. Agent applies documentation insights to code
-{"tool": "vscode_format_document", "args": {}}
-{"tool": "vscode_set_editor_content", "args": {...}}
-
-// 4. Agent commits changes using VS Code Git
-{"tool": "vscode_git_commit", "args": {"message": "Applied best practices from docs"}}
-```
-
-## Benefits
-
-1. **Unified Tool Access**: Agents access both external services and VS Code features through same interface
-2. **Enhanced Capabilities**: Complex workflows combining external data with direct IDE manipulation
-3. **Consistent Coordination**: Same task management for all tool types
-4. **Security**: Controlled access to powerful VS Code features
-5. **Extensibility**: Easy to add new VS Code capabilities as needs arise
-
-## Implementation Status & Updated Roadmap
-
-### ✅ **COMPLETED - Phase 1: Core VS Code Tool Provider (August 23, 2025)**
-
-**Successfully Implemented & Tested:**
-
-- ✅ VSCodeToolProvider module with 12 core tools
-- ✅ VSCodePermissions system with 6 permission levels
-- ✅ Integration with UnifiedMCPServer tool discovery and routing
-- ✅ Security controls: path sandboxing, command whitelisting, audit logging
-- ✅ Agent coordination integration (tasks, assignments, coordination)
-
-**Working Tools:**
-
-- ✅ File Operations: `vscode_read_file`, `vscode_write_file`, `vscode_create_file`, `vscode_delete_file`, `vscode_list_directory`
-- ✅ Editor Operations: `vscode_get_active_editor`, `vscode_set_editor_content`, `vscode_get_selection`, `vscode_set_selection`
-- ✅ Commands: `vscode_run_command`, `vscode_show_message`
-- ✅ Workspace: `vscode_get_workspace_folders`
-
-**Key Achievement:** VS Code tools now work seamlessly alongside external MCP servers through unified agent coordination!
-
-### 🔄 **CURRENT PRIORITY - Phase 1.5: VS Code Extension API Bridge**
-
-**Status:** Tools currently return placeholder data. Need to implement actual VS Code Extension API calls.
-
-**Implementation Steps:**
-
-1. **JavaScript Bridge Module** - Create communication layer between Elixir and VS Code Extension API
-2. **Real API Integration** - Replace placeholder responses with actual VS Code API calls
-3. **Error Handling** - Robust error handling for VS Code API failures
-4. **Testing** - Verify all tools work with real VS Code operations
-
-**Target Completion:** Next 2-3 days
-
-### 📅 **UPDATED IMPLEMENTATION TIMELINE**
-
-#### **Phase 2: Language Services & Advanced Editor Operations (Priority: High)**
-
-**Target:** Week of August 26, 2025
-
-**Tools to Implement:**
-
-- `vscode_get_diagnostics` - Get language server diagnostics
-- `vscode_format_document` - Format current document
-- `vscode_format_selection` - Format selected text
-- `vscode_find_references` - Find symbol references
-- `vscode_go_to_definition` - Navigate to definition
-- `vscode_rename_symbol` - Rename symbols across workspace
-- `vscode_code_actions` - Get available code actions
-- `vscode_apply_code_action` - Apply specific code action
-
-**Value:** Enables agents to perform intelligent code analysis and refactoring
-
-#### **Phase 3: Search, Navigation & Workspace Management (Priority: Medium)**
-
-**Target:** Week of September 2, 2025
-
-**Tools to Implement:**
-
-- `vscode_find_in_files` - Search across workspace with regex support
-- `vscode_find_symbols` - Find symbols in workspace
-- `vscode_goto_line` - Navigate to specific line/column
-- `vscode_reveal_in_explorer` - Show file in explorer
-- `vscode_open_folder` - Open workspace folder
-- `vscode_close_folder` - Close workspace folder
-- `vscode_switch_editor_tab` - Switch between open files
-
-**Value:** Enables agents to navigate and understand large codebases
-
-#### **Phase 4: Terminal & Process Management (Priority: Medium)**
-
-**Target:** Week of September 9, 2025
-
-**Tools to Implement:**
-
-- `vscode_create_terminal` - Create new terminal instance
-- `vscode_send_to_terminal` - Send commands to terminal
-- `vscode_get_terminal_output` - Get terminal output (if possible via API)
-- `vscode_close_terminal` - Close terminal instances
-- `vscode_run_task` - Execute VS Code tasks (build, test, etc.)
-- `vscode_get_tasks` - List available tasks
-- `vscode_stop_task` - Stop running task
-
-**Value:** Enables agents to manage build processes and execute commands
-
-#### **Phase 5: Git & Version Control Integration (Priority: High)**
-
-**Target:** Week of September 16, 2025
-
-**Tools to Implement:**
-
-- `vscode_git_status` - Get repository status
-- `vscode_git_commit` - Create commits with messages
-- `vscode_git_push` - Push changes to remote
-- `vscode_git_pull` - Pull changes from remote
-- `vscode_git_branch` - Branch operations (create, switch, delete)
-- `vscode_git_diff` - Get file differences
-- `vscode_git_stage` - Stage/unstage files
-- `vscode_git_blame` - Get blame information
-
-**Value:** Enables agents to manage version control workflows
-
-#### **Phase 6: Advanced Features & Extension Management (Priority: Low)**
-
-**Target:** Week of September 23, 2025
-
-**Tools to Implement:**
-
-- `vscode_get_settings` - Get VS Code settings
-- `vscode_update_settings` - Update settings
-- `vscode_get_extensions` - List installed extensions
-- `vscode_install_extension` - Install extensions (if permitted)
-- `vscode_debug_start` - Start debugging session
-- `vscode_debug_stop` - Stop debugging
-- `vscode_set_breakpoint` - Set/remove breakpoints
-
-**Value:** Complete IDE automation capabilities
-
-### 🚀 **Key Insights from Phase 1**
-
-1. **Integration Success**: The MCP tool routing system works perfectly for VS Code tools
-2. **Permission System**: Granular permissions are essential for security
-3. **Agent Coordination**: VS Code tools integrate seamlessly with task management
-4. **Unified Experience**: Agents can now use external services + VS Code through same interface
-
-### 🎯 **Next Immediate Actions**
-
-1. **Priority 1**: Implement proper agent identification system for multi-agent scenarios
-2. **Priority 2**: Implement real VS Code Extension API bridge (replace placeholders)
-3. **Priority 3**: Add Phase 2 language services tools
-4. **Priority 4**: Create comprehensive testing suite
-5. **Priority 5**: Document usage patterns and best practices
-
-### 🔧 **Critical Enhancement: Multi-Agent Identification System**
-
-**Problem:** Current system treats all GitHub Copilot instances as the same agent, causing conflicts in multi-agent scenarios.
-
-**Solution:** Implement unique agent identification with session-based tracking.
-
-**Implementation Requirements:**
-
-1. **Agent ID Parameter**: All tools must include an `agent_id` parameter
-2. **Session-Based Registration**: Each chat session/agent instance gets unique ID
-3. **Tool Schema Updates**: Add `agent_id` to all VS Code tool schemas
-4. **Auto-Registration**: System automatically creates unique agents per session
-5. **Agent Isolation**: Tasks, permissions, and state isolated per agent ID
-
-**Benefits:**
-
-- Multiple agents can work simultaneously without conflicts
-- Individual agent permissions and capabilities
-- Proper task assignment and coordination
-- Clear audit trails per agent
-
-### 📊 **Success Metrics**
-
-- **Tool Reliability**: >95% success rate for all VS Code tool calls
-- **Performance**: <500ms average response time for VS Code operations
-- **Security**: Zero security incidents with workspace sandboxing
-- **Integration**: All tools work seamlessly with agent coordination system
-- **Adoption**: Agents can complete full development workflows using only coordinated tools## Testing Strategy
-
-1. **Unit Tests**: Each VS Code tool function
-2. **Integration Tests**: Tool coordination and routing
-3. **Security Tests**: Permission enforcement and sandboxing
-4. **Performance Tests**: Rate limiting and resource usage
-5. **User Acceptance**: Real workflow testing with multiple agents
-
-## Future Enhancements
-
-- **Extension-specific Tools**: Tools for specific VS Code extensions
-- **Collaborative Features**: Multi-agent editing coordination
-- **AI-Enhanced Operations**: Intelligent code suggestions and fixes
-- **Remote Development**: Support for remote VS Code scenarios
-- **Custom Tool Creation**: Framework for users to create their own VS Code tools
-
----
-
-## Notes
-
-This implementation transforms the Agent Coordinator from a simple MCP proxy into a comprehensive development environment orchestrator, enabling sophisticated AI-assisted development workflows.

examples/director_demo.exs

@@ -0,0 +1,461 @@
+#!/usr/bin/env elixir
+
+# Director Management Demo Script
+# 
+# This script demonstrates the director role functionality:
+# 1. Register a director agent with oversight capabilities
+# 2. Register multiple standard agents for the director to manage
+# 3. Show director observing and managing other agents
+# 4. Demonstrate task assignment, feedback, and redundancy detection
+# 5. Show autonomous workflow coordination
+
+Mix.install([
+  {:agent_coordinator, path: "."}
+])
+
+defmodule DirectorDemo do
+  alias AgentCoordinator.{TaskRegistry, Inbox, Agent, Task}
+
+  def run do
+    IO.puts("\n🎬 Director Management Demo Starting...")
+    IO.puts("=" <> String.duplicate("=", 50))
+    
+    # Start the Agent Coordinator application
+    {:ok, _} = AgentCoordinator.Application.start(:normal, [])
+    :timer.sleep(2000)  # Give more time for startup
+    
+    # Setup demo scenario
+    setup_demo_scenario()
+    
+    # Demonstrate director capabilities
+    demo_director_observations()
+    demo_task_management()
+    demo_redundancy_detection()
+    demo_autonomous_workflow()
+    
+    IO.puts("\n✅ Director Management Demo Complete!")
+    IO.puts("=" <> String.duplicate("=", 50))
+  end
+  
+  defp setup_demo_scenario do
+    IO.puts("\n📋 Setting up demo scenario...")
+    
+    # Register a global director
+    director_opts = %{
+      role: :director,
+      oversight_scope: :global,
+      capabilities: ["management", "coordination", "oversight", "coding"],
+      workspace_path: "/home/ra/agent_coordinator",
+      codebase_id: "agent_coordinator"
+    }
+    
+    {:ok, director_id} = TaskRegistry.register_agent("Director Phoenix Eagle", director_opts)
+    IO.puts("✅ Registered Director: #{director_id}")
+    
+    # Register several standard agents for the director to manage
+    agents = [
+      {"Frontend Developer Ruby Shark", %{capabilities: ["coding", "testing"], role: :standard}},
+      {"Backend Engineer Silver Wolf", %{capabilities: ["coding", "analysis"], role: :standard}},
+      {"QA Tester Golden Panda", %{capabilities: ["testing", "documentation"], role: :standard}},
+      {"DevOps Engineer Blue Tiger", %{capabilities: ["coding", "review"], role: :standard}}
+    ]
+    
+    agent_ids = Enum.map(agents, fn {name, opts} ->
+      base_opts = Map.merge(opts, %{
+        workspace_path: "/home/ra/agent_coordinator",
+        codebase_id: "agent_coordinator"
+      })
+      {:ok, agent_id} = TaskRegistry.register_agent(name, base_opts)
+      IO.puts("✅ Registered Agent: #{name} (#{agent_id})")
+      
+      # Add some initial tasks to create realistic scenario
+      add_demo_tasks(agent_id, name)
+      
+      agent_id
+    end)
+    
+    %{director_id: director_id, agent_ids: agent_ids}
+  end
+  
+  defp add_demo_tasks(agent_id, agent_name) do
+    tasks = case agent_name do
+      "Frontend Developer" <> _ -> [
+        {"Implement User Dashboard", "Create responsive dashboard with user stats and activity feed"},
+        {"Fix CSS Layout Issues", "Resolve responsive design problems on mobile devices"},
+        {"Add Dark Mode Support", "Implement theme switching with proper contrast ratios"}
+      ]
+      "Backend Engineer" <> _ -> [
+        {"Optimize Database Queries", "Review and optimize slow queries in user management system"},
+        {"Implement API Rate Limiting", "Add rate limiting to prevent API abuse"},
+        {"Fix Authentication Bug", "Resolve JWT token refresh issue causing user logouts"}
+      ]
+      "QA Tester" <> _ -> [
+        {"Write End-to-End Tests", "Create comprehensive test suite for user authentication flow"},
+        {"Performance Testing", "Conduct load testing on API endpoints"},
+        {"Fix Authentication Bug", "Validate JWT token refresh fix from backend team"}  # Intentional duplicate
+      ]
+      "DevOps Engineer" <> _ -> [
+        {"Setup CI/CD Pipeline", "Configure automated testing and deployment pipeline"},
+        {"Monitor System Performance", "Setup monitoring dashboards and alerting"},
+        {"Optimize Database Queries", "Database performance tuning and indexing"}  # Intentional duplicate
+      ]
+    end
+    
+    Enum.each(tasks, fn {title, description} ->
+      task = Task.new(title, description, %{
+        priority: Enum.random([:low, :normal, :high]),
+        codebase_id: "agent_coordinator"
+      })
+      Inbox.add_task(agent_id, task)
+    end)
+  end
+  
+  defp demo_director_observations do
+    IO.puts("\n👁️  Director Observation Capabilities")
+    IO.puts("-" <> String.duplicate("-", 40))
+    
+    # Get the director agent
+    agents = TaskRegistry.list_agents()
+    director = Enum.find(agents, fn agent -> Agent.is_director?(agent) end)
+    
+    if director do
+      IO.puts("🔍 Director '#{director.name}' observing all agents...")
+      
+      # Simulate director observing agents
+      args = %{
+        "agent_id" => director.id,
+        "scope" => "codebase",
+        "include_activity_history" => true
+      }
+      
+      # This would normally be called through MCP, but we'll call directly for demo
+      result = observe_all_agents_demo(director, args)
+      
+      case result do
+        {:ok, observation} ->
+          IO.puts("📊 Observation Results:")
+          IO.puts("  - Total Agents: #{observation.total_agents}")
+          IO.puts("  - Oversight Scope: #{observation.oversight_capability}")
+          
+          Enum.each(observation.agents, fn agent_info ->
+            task_count = %{
+              pending: length(agent_info.tasks.pending),
+              in_progress: if(agent_info.tasks.in_progress, do: 1, else: 0),
+              completed: length(agent_info.tasks.completed)
+            }
+            
+            IO.puts("  📋 #{agent_info.name}:")
+            IO.puts("      Role: #{agent_info.role} | Status: #{agent_info.status}")
+            IO.puts("      Tasks: #{task_count.pending} pending, #{task_count.in_progress} active, #{task_count.completed} done")
+            IO.puts("      Capabilities: #{Enum.join(agent_info.capabilities, ", ")}")
+          end)
+          
+        {:error, reason} ->
+          IO.puts("❌ Observation failed: #{reason}")
+      end
+    else
+      IO.puts("❌ No director found in system")
+    end
+  end
+  
+  defp observe_all_agents_demo(director, args) do
+    # Simplified version of the actual function for demo
+    all_agents = TaskRegistry.list_agents()
+    |> Enum.filter(fn a -> a.codebase_id == director.codebase_id end)
+    
+    detailed_agents = Enum.map(all_agents, fn target_agent ->
+      task_info = case Inbox.list_tasks(target_agent.id) do
+        {:error, _} -> %{pending: [], in_progress: nil, completed: []}
+        tasks -> tasks
+      end
+      
+      %{
+        agent_id: target_agent.id,
+        name: target_agent.name,
+        role: target_agent.role,
+        capabilities: target_agent.capabilities,
+        status: target_agent.status,
+        codebase_id: target_agent.codebase_id,
+        managed_by_director: target_agent.id in (director.managed_agents || []),
+        tasks: task_info
+      }
+    end)
+    
+    {:ok, %{
+      director_id: director.id,
+      scope: "codebase",
+      oversight_capability: director.oversight_scope,
+      agents: detailed_agents,
+      total_agents: length(detailed_agents),
+      timestamp: DateTime.utc_now()
+    }}
+  end
+  
+  defp demo_task_management do
+    IO.puts("\n📝 Director Task Management")
+    IO.puts("-" <> String.duplicate("-", 40))
+    
+    agents = TaskRegistry.list_agents()
+    director = Enum.find(agents, fn agent -> Agent.is_director?(agent) end)
+    standard_agents = Enum.filter(agents, fn agent -> !Agent.is_director?(agent) end)
+    
+    if director && length(standard_agents) > 0 do
+      target_agent = Enum.random(standard_agents)
+      
+      IO.puts("🎯 Director assigning new task to #{target_agent.name}...")
+      
+      # Create a high-priority coordination task
+      new_task = %{
+        "title" => "Team Coordination Meeting",
+        "description" => "Organize cross-functional team sync to align on project priorities and resolve blockers. Focus on identifying dependencies between frontend, backend, and QA work streams.",
+        "priority" => "high",
+        "file_paths" => []
+      }
+      
+      # Director assigns the task
+      task = Task.new(new_task["title"], new_task["description"], %{
+        priority: :high,
+        codebase_id: target_agent.codebase_id,
+        assignment_reason: "Director identified need for team alignment",
+        metadata: %{
+          director_assigned: true,
+          director_id: director.id
+        }
+      })
+      
+      case Inbox.add_task(target_agent.id, task) do
+        :ok ->
+          IO.puts("✅ Task assigned successfully!")
+          IO.puts("   Task: #{task.title}")
+          IO.puts("   Assigned to: #{target_agent.name}")
+          IO.puts("   Priority: #{task.priority}")
+          IO.puts("   Reason: #{task.assignment_reason}")
+          
+          # Update director's managed agents list
+          updated_director = Agent.add_managed_agent(director, target_agent.id)
+          TaskRegistry.update_agent(director.id, updated_director)
+          
+        {:error, reason} ->
+          IO.puts("❌ Task assignment failed: #{reason}")
+      end
+      
+      IO.puts("\n💬 Director providing task feedback...")
+      
+      # Simulate director providing feedback on existing tasks
+      {:ok, tasks} = Inbox.list_tasks(target_agent.id)
+      if length(tasks.pending) > 0 do
+        sample_task = Enum.random(tasks.pending)
+        
+        feedback_examples = [
+          "Consider breaking this task into smaller, more manageable subtasks for better tracking.",
+          "This aligns well with the current sprint goals. Prioritize integration with the new API endpoints.",
+          "Coordinate with the QA team before implementation to ensure test coverage is adequate.",
+          "This task may have dependencies on the backend authentication work. Check with the backend team first."
+        ]
+        
+        feedback = Enum.random(feedback_examples)
+        
+        IO.puts("📋 Feedback for task '#{sample_task.title}':")
+        IO.puts("   💡 #{feedback}")
+        IO.puts("   ⏰ Timestamp: #{DateTime.utc_now()}")
+      end
+      
+    else
+      IO.puts("❌ No director or standard agents found for task management demo")
+    end
+  end
+  
+  defp demo_redundancy_detection do
+    IO.puts("\n🔍 Director Redundancy Detection")
+    IO.puts("-" <> String.duplicate("-", 40))
+    
+    agents = TaskRegistry.list_agents()
+    director = Enum.find(agents, fn agent -> Agent.is_director?(agent) end)
+    
+    if director do
+      IO.puts("🔎 Analyzing tasks across all agents for redundancy...")
+      
+      # Collect all tasks from all agents
+      all_agents = Enum.filter(agents, fn a -> a.codebase_id == director.codebase_id end)
+      all_tasks = Enum.flat_map(all_agents, fn agent ->
+        case Inbox.list_tasks(agent.id) do
+          {:error, _} -> []
+          tasks -> 
+            (tasks.pending ++ (if tasks.in_progress, do: [tasks.in_progress], else: []))
+            |> Enum.map(fn task -> Map.put(task, :agent_id, agent.id) end)
+        end
+      end)
+      
+      IO.puts("📊 Total tasks analyzed: #{length(all_tasks)}")
+      
+      # Detect redundant tasks (simplified similarity detection)
+      redundant_groups = detect_similar_tasks_demo(all_tasks)
+      
+      if length(redundant_groups) > 0 do
+        IO.puts("⚠️  Found #{length(redundant_groups)} groups of potentially redundant tasks:")
+        
+        Enum.each(redundant_groups, fn group ->
+          IO.puts("\n  🔄 Redundant Group: '#{group.similarity_key}'")
+          IO.puts("     Task count: #{group.task_count}")
+          
+          Enum.each(group.tasks, fn task ->
+            agent = Enum.find(agents, fn a -> a.id == task.agent_id end)
+            agent_name = if agent, do: agent.name, else: "Unknown Agent"
+            IO.puts("     - #{task.title} (#{agent_name})")
+          end)
+          
+          IO.puts("     🎯 Recommendation: Consider consolidating these similar tasks or clearly define distinct responsibilities.")
+        end)
+        
+        total_redundant = Enum.sum(Enum.map(redundant_groups, fn g -> g.task_count end))
+        IO.puts("\n📈 Impact Analysis:")
+        IO.puts("   - Total redundant tasks: #{total_redundant}")
+        IO.puts("   - Potential efficiency gain: #{round(total_redundant / length(all_tasks) * 100)}%")
+        
+      else
+        IO.puts("✅ No redundant tasks detected. Teams are well-coordinated!")
+      end
+      
+    else
+      IO.puts("❌ No director found for redundancy detection")
+    end
+  end
+  
+  defp detect_similar_tasks_demo(tasks) do
+    # Group tasks by normalized title keywords
+    tasks
+    |> Enum.group_by(fn task -> 
+      # Normalize title for comparison
+      String.downcase(task.title)
+      |> String.replace(~r/[^\w\s]/, "")
+      |> String.split()
+      |> Enum.take(3)
+      |> Enum.join(" ")
+    end)
+    |> Enum.filter(fn {_key, group_tasks} -> length(group_tasks) > 1 end)
+    |> Enum.map(fn {key, group_tasks} ->
+      %{
+        similarity_key: key,
+        tasks: Enum.map(group_tasks, fn task ->
+          %{
+            task_id: task.id,
+            title: task.title,
+            agent_id: task.agent_id,
+            codebase_id: task.codebase_id
+          }
+        end),
+        task_count: length(group_tasks)
+      }
+    end)
+  end
+  
+  defp demo_autonomous_workflow do
+    IO.puts("\n🤖 Director Autonomous Workflow Coordination")
+    IO.puts("-" <> String.duplicate("-", 50))
+    
+    agents = TaskRegistry.list_agents()
+    director = Enum.find(agents, fn agent -> Agent.is_director?(agent) end)
+    standard_agents = Enum.filter(agents, fn agent -> !Agent.is_director?(agent) end)
+    
+    if director && length(standard_agents) >= 2 do
+      IO.puts("🎭 Simulating autonomous workflow coordination scenario...")
+      IO.puts("\nScenario: Director detects that authentication bug fixes require coordination")
+      IO.puts("between Backend Engineer and QA Tester.")
+      
+      # Find agents working on authentication
+      backend_agent = Enum.find(standard_agents, fn agent -> 
+        String.contains?(agent.name, "Backend")
+      end)
+      
+      qa_agent = Enum.find(standard_agents, fn agent -> 
+        String.contains?(agent.name, "QA")
+      end)
+      
+      if backend_agent && qa_agent do
+        IO.puts("\n1️⃣ Director sending coordination input to Backend Engineer...")
+        
+        coordination_message = """
+        🤖 Director Coordination: 
+        
+        I've identified that your JWT authentication fix needs to be coordinated with QA testing.
+        
+        Action Required:
+        - Notify QA team when your fix is ready for testing
+        - Provide test credentials and reproduction steps
+        - Schedule knowledge transfer session if needed
+        
+        This will help avoid testing delays and ensure comprehensive coverage.
+        """
+        
+        # Simulate sending input to backend agent
+        IO.puts("📤 Sending message to #{backend_agent.name}:")
+        IO.puts("   Input Type: chat_message")
+        IO.puts("   Content: [Coordination message about JWT fix coordination]")
+        IO.puts("   Context: authentication_workflow_coordination")
+        
+        IO.puts("\n2️⃣ Director sending parallel input to QA Tester...")
+        
+        qa_message = """
+        🤖 Director Coordination:
+        
+        Backend team is working on JWT authentication fix. Please prepare for coordinated testing.
+        
+        Action Required:
+        - Review current authentication test cases
+        - Prepare test environment for JWT token scenarios
+        - Block time for testing once backend fix is ready
+        
+        I'll facilitate the handoff between teams when implementation is complete.
+        """
+        
+        IO.puts("📤 Sending message to #{qa_agent.name}:")
+        IO.puts("   Input Type: chat_message") 
+        IO.puts("   Content: [Coordination message about authentication testing prep]")
+        IO.puts("   Context: authentication_workflow_coordination")
+        
+        IO.puts("\n3️⃣ Director scheduling follow-up coordination...")
+        
+        # Create coordination task
+        coordination_task = Task.new(
+          "Authentication Fix Coordination Follow-up",
+          "Check progress on JWT fix coordination between backend and QA teams. Ensure handoff is smooth and testing is proceeding without blockers.",
+          %{
+            priority: :normal,
+            codebase_id: director.codebase_id,
+            assignment_reason: "Autonomous workflow coordination",
+            metadata: %{
+              workflow_type: "authentication_coordination",
+              involves_agents: [backend_agent.id, qa_agent.id],
+              coordination_phase: "follow_up"
+            }
+          }
+        )
+        
+        Inbox.add_task(director.id, coordination_task)
+        IO.puts("✅ Created follow-up coordination task for director")
+        
+        IO.puts("\n🎯 Autonomous Workflow Benefits Demonstrated:")
+        IO.puts("   ✅ Proactive cross-team coordination")
+        IO.puts("   ✅ Parallel communication to reduce delays")
+        IO.puts("   ✅ Automated follow-up task creation")
+        IO.puts("   ✅ Context-aware workflow management")
+        IO.puts("   ✅ Human-out-of-the-loop efficiency")
+        
+        IO.puts("\n🔮 Next Steps in Full Implementation:")
+        IO.puts("   - VSCode integration for real agent messaging")
+        IO.puts("   - Workflow templates for common coordination patterns")
+        IO.puts("   - ML-based task dependency detection")
+        IO.puts("   - Automated testing trigger coordination")
+        IO.puts("   - Cross-codebase workflow orchestration")
+        
+      else
+        IO.puts("❌ Could not find Backend and QA agents for workflow demo")
+      end
+    else
+      IO.puts("❌ Insufficient agents for autonomous workflow demonstration")
+    end
+  end
+end
+
+# Run the demo
+DirectorDemo.run()

examples/mcp_client_example.py

@@ -1,193 +0,0 @@
-#!/usr/bin/env python3
-"""
-AgentCoordinator MCP Client Example
-
-This script demonstrates how to connect to and interact with the
-AgentCoordinator MCP server programmatically.
-"""
-
-import json
-import subprocess
-import uuid
-from typing import Any, Dict, Optional
-
-
-class AgentCoordinatorMCP:
-    def __init__(self, launcher_path: str = "./scripts/mcp_launcher.sh"):
-        self.launcher_path = launcher_path
-        self.process = None
-
-    def start(self):
-        """Start the MCP server process"""
-        try:
-            self.process = subprocess.Popen(
-                [self.launcher_path],
-                stdin=subprocess.PIPE,
-                stdout=subprocess.PIPE,
-                stderr=subprocess.PIPE,
-                text=True,
-                bufsize=0
-            )
-            print("🚀 MCP server started")
-            return True
-        except Exception as e:
-            print(f"❌ Failed to start MCP server: {e}")
-            return False
-
-    def stop(self):
-        """Stop the MCP server process"""
-        if self.process:
-            self.process.terminate()
-            self.process.wait()
-            print("🛑 MCP server stopped")
-
-    def send_request(self, method: str, params: Optional[Dict[str, Any]] = None) -> Dict[str, Any]:
-        """Send a JSON-RPC request to the MCP server"""
-        if not self.process:
-            raise RuntimeError("MCP server not started")
-
-        request = {
-            "jsonrpc": "2.0",
-            "id": str(uuid.uuid4()),
-            "method": method
-        }
-
-        if params:
-            request["params"] = params
-
-        # Send request
-        request_json = json.dumps(request) + "\n"
-        self.process.stdin.write(request_json)
-        self.process.stdin.flush()
-
-        # Read response
-        response_line = self.process.stdout.readline()
-        if not response_line:
-            raise RuntimeError("No response from MCP server")
-
-        return json.loads(response_line.strip())
-
-    def get_tools(self) -> Dict[str, Any]:
-        """Get list of available tools"""
-        return self.send_request("tools/list")
-
-    def register_agent(self, name: str, capabilities: list) -> Dict[str, Any]:
-        """Register a new agent"""
-        return self.send_request("tools/call", {
-            "name": "register_agent",
-            "arguments": {
-                "name": name,
-                "capabilities": capabilities
-            }
-        })
-
-    def create_task(self, title: str, description: str, priority: str = "normal",
-                   required_capabilities: list = None) -> Dict[str, Any]:
-        """Create a new task"""
-        args = {
-            "title": title,
-            "description": description,
-            "priority": priority
-        }
-        if required_capabilities:
-            args["required_capabilities"] = required_capabilities
-
-        return self.send_request("tools/call", {
-            "name": "create_task",
-            "arguments": args
-        })
-
-    def get_next_task(self, agent_id: str) -> Dict[str, Any]:
-        """Get next task for an agent"""
-        return self.send_request("tools/call", {
-            "name": "get_next_task",
-            "arguments": {"agent_id": agent_id}
-        })
-
-    def complete_task(self, agent_id: str, result: str) -> Dict[str, Any]:
-        """Complete current task"""
-        return self.send_request("tools/call", {
-            "name": "complete_task",
-            "arguments": {
-                "agent_id": agent_id,
-                "result": result
-            }
-        })
-
-    def get_task_board(self) -> Dict[str, Any]:
-        """Get task board overview"""
-        return self.send_request("tools/call", {
-            "name": "get_task_board",
-            "arguments": {}
-        })
-
-    def heartbeat(self, agent_id: str) -> Dict[str, Any]:
-        """Send agent heartbeat"""
-        return self.send_request("tools/call", {
-            "name": "heartbeat",
-            "arguments": {"agent_id": agent_id}
-        })
-
-def demo():
-    """Demonstrate MCP client functionality"""
-    print("🎯 AgentCoordinator MCP Client Demo")
-    print("=" * 50)
-
-    client = AgentCoordinatorMCP()
-
-    try:
-        # Start server
-        if not client.start():
-            return
-
-        # Wait for server to be ready
-        import time
-        time.sleep(2)
-
-        # Get tools
-        print("\n📋 Available tools:")
-        tools_response = client.get_tools()
-        if "result" in tools_response:
-            for tool in tools_response["result"]["tools"]:
-                print(f"  - {tool['name']}: {tool['description']}")
-
-        # Register agent
-        print("\n👤 Registering agent...")
-        register_response = client.register_agent("PythonAgent", ["coding", "testing"])
-        if "result" in register_response:
-            content = register_response["result"]["content"][0]["text"]
-            agent_data = json.loads(content)
-            agent_id = agent_data["agent_id"]
-            print(f"✅ Agent registered: {agent_id}")
-
-            # Create task
-            print("\n📝 Creating task...")
-            task_response = client.create_task(
-                "Python Script",
-                "Write a Python script for data processing",
-                "high",
-                ["coding"]
-            )
-            if "result" in task_response:
-                content = task_response["result"]["content"][0]["text"]
-                task_data = json.loads(content)
-                print(f"✅ Task created: {task_data['task_id']}")
-
-            # Get task board
-            print("\n📊 Task board:")
-            board_response = client.get_task_board()
-            if "result" in board_response:
-                content = board_response["result"]["content"][0]["text"]
-                board_data = json.loads(content)
-                for agent in board_data["agents"]:
-                    print(f"  📱 {agent['name']}: {agent['status']}")
-                    print(f"     Capabilities: {', '.join(agent['capabilities'])}")
-                    print(f"     Pending: {agent['pending_tasks']}, Completed: {agent['completed_tasks']}")
-
-    except Exception as e:
-        print(f"❌ Error: {e}")
-    finally:
-        client.stop()
-
-if __name__ == "__main__":
-    demo()

lib/agent_coordinator/activity_tracker.ex

@@ -0,0 +1,300 @@
+defmodule AgentCoordinator.ActivityTracker do
+  @moduledoc """
+  Tracks agent activities based on tool calls and infers human-readable activity descriptions.
+  """
+
+  alias AgentCoordinator.{Agent, TaskRegistry}
+
+  @doc """
+  Infer activity description and files from tool name and arguments.
+  Returns {activity_description, files_list}.
+  """
+  def infer_activity(tool_name, args) do
+    case tool_name do
+      # File operations
+      "read_file" ->
+        file_path = extract_file_path(args)
+        {"Reading #{Path.basename(file_path || "file")}", [file_path]}
+
+      "read_text_file" ->
+        file_path = extract_file_path(args)
+        {"Reading #{Path.basename(file_path || "file")}", [file_path]}
+
+      "read_multiple_files" ->
+        files = Map.get(args, "paths", [])
+        file_names = Enum.map(files, &Path.basename/1)
+        {"Reading #{length(files)} files: #{Enum.join(file_names, ", ")}", files}
+
+      "write_file" ->
+        file_path = extract_file_path(args)
+        {"Writing #{Path.basename(file_path || "file")}", [file_path]}
+
+      "edit_file" ->
+        file_path = extract_file_path(args)
+        {"Editing #{Path.basename(file_path || "file")}", [file_path]}
+
+      "create_file" ->
+        file_path = extract_file_path(args)
+        {"Creating #{Path.basename(file_path || "file")}", [file_path]}
+
+      "move_file" ->
+        source = Map.get(args, "source")
+        dest = Map.get(args, "destination")
+        files = [source, dest] |> Enum.filter(& &1)
+
+        {"Moving #{Path.basename(source || "file")} to #{Path.basename(dest || "destination")}",
+         files}
+
+      # VS Code operations
+      "vscode_read_file" ->
+        file_path = extract_file_path(args)
+        {"Reading #{Path.basename(file_path || "file")} in VS Code", [file_path]}
+
+      "vscode_write_file" ->
+        file_path = extract_file_path(args)
+        {"Writing #{Path.basename(file_path || "file")} in VS Code", [file_path]}
+
+      "vscode_set_editor_content" ->
+        file_path = Map.get(args, "file_path")
+
+        if file_path do
+          {"Editing #{Path.basename(file_path)} in VS Code", [file_path]}
+        else
+          {"Editing active file in VS Code", []}
+        end
+
+      "vscode_get_active_editor" ->
+        {"Viewing active editor in VS Code", []}
+
+      "vscode_get_selection" ->
+        {"Viewing text selection in VS Code", []}
+
+      # Directory operations
+      "list_directory" ->
+        path = extract_file_path(args)
+        {"Browsing directory #{Path.basename(path || ".")}", []}
+
+      "list_directory_with_sizes" ->
+        path = extract_file_path(args)
+        {"Browsing directory #{Path.basename(path || ".")} with sizes", []}
+
+      "directory_tree" ->
+        path = extract_file_path(args)
+        {"Exploring directory tree for #{Path.basename(path || ".")}", []}
+
+      "create_directory" ->
+        path = extract_file_path(args)
+        {"Creating directory #{Path.basename(path || "directory")}", []}
+
+      # Search operations
+      "search_files" ->
+        pattern = Map.get(args, "pattern", "files")
+        {"Searching for #{pattern}", []}
+
+      "grep_search" ->
+        query = Map.get(args, "query", "text")
+        {"Searching for '#{query}' in files", []}
+
+      "semantic_search" ->
+        query = Map.get(args, "query", "content")
+        {"Semantic search for '#{query}'", []}
+
+      # Thinking operations
+      "sequentialthinking" ->
+        thought = Map.get(args, "thought", "")
+        thought_summary = String.slice(thought, 0, 50) |> String.trim()
+        {"Sequential thinking: #{thought_summary}...", []}
+
+      # Terminal operations
+      "run_in_terminal" ->
+        command = Map.get(args, "command", "command")
+        command_summary = String.slice(command, 0, 30) |> String.trim()
+        {"Running: #{command_summary}...", []}
+
+      "get_terminal_output" ->
+        {"Checking terminal output", []}
+
+      # Test operations
+      "runTests" ->
+        files = Map.get(args, "files", [])
+
+        if files != [] do
+          file_names = Enum.map(files, &Path.basename/1)
+          {"Running tests in #{Enum.join(file_names, ", ")}", files}
+        else
+          {"Running all tests", []}
+        end
+
+      # Task management
+      "create_task" ->
+        title = Map.get(args, "title", "task")
+        {"Creating task: #{title}", []}
+
+      "get_next_task" ->
+        {"Getting next task", []}
+
+      "complete_task" ->
+        {"Completing current task", []}
+
+      # Knowledge operations
+      "create_entities" ->
+        entities = Map.get(args, "entities", [])
+        count = length(entities)
+        {"Creating #{count} knowledge entities", []}
+
+      "create_relations" ->
+        relations = Map.get(args, "relations", [])
+        count = length(relations)
+        {"Creating #{count} knowledge relations", []}
+
+      "search_nodes" ->
+        query = Map.get(args, "query", "nodes")
+        {"Searching knowledge graph for '#{query}'", []}
+
+      "read_graph" ->
+        {"Reading knowledge graph", []}
+
+      # HTTP/Web operations
+      "fetch_webpage" ->
+        urls = Map.get(args, "urls", [])
+
+        if urls != [] do
+          {"Fetching #{length(urls)} webpages", []}
+        else
+          {"Fetching webpage", []}
+        end
+
+      # Development operations
+      "get_errors" ->
+        files = Map.get(args, "filePaths", [])
+
+        if files != [] do
+          file_names = Enum.map(files, &Path.basename/1)
+          {"Checking errors in #{Enum.join(file_names, ", ")}", files}
+        else
+          {"Checking all errors", []}
+        end
+
+      "list_code_usages" ->
+        symbol = Map.get(args, "symbolName", "symbol")
+        {"Finding usages of #{symbol}", []}
+
+      # Elixir-specific operations
+      "elixir-definition" ->
+        symbol = Map.get(args, "symbol", "symbol")
+        {"Finding definition of #{symbol}", []}
+
+      "elixir-docs" ->
+        modules = Map.get(args, "modules", [])
+
+        if modules != [] do
+          {"Getting docs for #{Enum.join(modules, ", ")}", []}
+        else
+          {"Getting Elixir documentation", []}
+        end
+
+      "elixir-environment" ->
+        location = Map.get(args, "location", "code")
+        {"Analyzing Elixir environment at #{location}", []}
+
+      # Python operations  
+      "pylanceRunCodeSnippet" ->
+        {"Running Python code snippet", []}
+
+      "pylanceFileSyntaxErrors" ->
+        file_uri = Map.get(args, "fileUri")
+
+        if file_uri do
+          file_path = uri_to_path(file_uri)
+          {"Checking syntax errors in #{Path.basename(file_path)}", [file_path]}
+        else
+          {"Checking Python syntax errors", []}
+        end
+
+      # Default cases
+      tool_name when is_binary(tool_name) ->
+        cond do
+          String.starts_with?(tool_name, "vscode_") ->
+            action = String.replace(tool_name, "vscode_", "") |> String.replace("_", " ")
+            {"VS Code: #{action}", []}
+
+          String.starts_with?(tool_name, "elixir-") ->
+            action = String.replace(tool_name, "elixir-", "") |> String.replace("-", " ")
+            {"Elixir: #{action}", []}
+
+          String.starts_with?(tool_name, "pylance") ->
+            action = String.replace(tool_name, "pylance", "") |> humanize_string()
+            {"Python: #{action}", []}
+
+          String.contains?(tool_name, "_") ->
+            action = String.replace(tool_name, "_", " ") |> String.capitalize()
+            {action, []}
+
+          true ->
+            {String.capitalize(tool_name), []}
+        end
+
+      _ ->
+        {"Unknown activity", []}
+    end
+  end
+
+  @doc """
+  Update an agent's activity based on a tool call.
+  """
+  def update_agent_activity(agent_id, tool_name, args) do
+    {activity, files} = infer_activity(tool_name, args)
+
+    case TaskRegistry.get_agent(agent_id) do
+      {:ok, agent} ->
+        updated_agent = Agent.update_activity(agent, activity, files)
+        # Update the agent in the registry
+        TaskRegistry.update_agent(agent_id, updated_agent)
+
+      {:error, _} ->
+        # Agent not found, ignore
+        :ok
+    end
+  end
+
+  @doc """
+  Clear an agent's activity (e.g., when they go idle).
+  """
+  def clear_agent_activity(agent_id) do
+    case TaskRegistry.get_agent(agent_id) do
+      {:ok, agent} ->
+        updated_agent = Agent.clear_activity(agent)
+        TaskRegistry.update_agent(agent_id, updated_agent)
+
+      {:error, _} ->
+        :ok
+    end
+  end
+
+  # Private helper functions
+
+  defp extract_file_path(args) do
+    # Try various common parameter names for file paths
+    args["path"] || args["filePath"] || args["file_path"] ||
+      args["source"] || args["destination"] || args["fileUri"] |> uri_to_path()
+  end
+
+  defp uri_to_path(nil), do: nil
+
+  defp uri_to_path(uri) when is_binary(uri) do
+    if String.starts_with?(uri, "file://") do
+      String.replace_prefix(uri, "file://", "")
+    else
+      uri
+    end
+  end
+
+  defp humanize_string(str) do
+    str
+    |> String.split(~r/[A-Z]/)
+    |> Enum.map(&String.downcase/1)
+    |> Enum.filter(&(&1 != ""))
+    |> Enum.join(" ")
+    |> String.capitalize()
+  end
+end

lib/agent_coordinator/agent.ex

@@ -13,7 +13,13 @@ defmodule AgentCoordinator.Agent do
              :codebase_id,
              :workspace_path,
              :last_heartbeat,
-             :metadata
+             :metadata,
+             :current_activity,
+             :current_files,
+             :activity_history,
+             :role,
+             :managed_agents,
+             :oversight_scope
            ]}
   defstruct [
     :id,
@@ -24,11 +30,26 @@ defmodule AgentCoordinator.Agent do
     :codebase_id,
     :workspace_path,
     :last_heartbeat,
-    :metadata
+    :metadata,
+    :current_activity,
+    :current_files,
+    :activity_history,
+    :role,
+    :managed_agents,
+    :oversight_scope
   ]
 
   @type status :: :idle | :busy | :offline | :error
-  @type capability :: :coding | :testing | :documentation | :analysis | :review
+  @type capability ::
+          :coding
+          | :testing
+          | :documentation
+          | :analysis
+          | :review
+          | :management
+          | :coordination
+          | :oversight
+  @type role :: :standard | :director | :project_manager
 
   @type t :: %__MODULE__{
           id: String.t(),
@@ -39,20 +60,59 @@ defmodule AgentCoordinator.Agent do
           codebase_id: String.t(),
           workspace_path: String.t() | nil,
           last_heartbeat: DateTime.t(),
-          metadata: map()
+          metadata: map(),
+          current_activity: String.t() | nil,
+          current_files: [String.t()],
+          activity_history: [map()],
+          role: role(),
+          managed_agents: [String.t()],
+          oversight_scope: :codebase | :global
         }
 
   def new(name, capabilities, opts \\ []) do
+    workspace_path = Keyword.get(opts, :workspace_path)
+
+    # Use smart codebase identification
+    codebase_id =
+      case Keyword.get(opts, :codebase_id) do
+        nil when workspace_path ->
+          # Auto-detect from workspace
+          case AgentCoordinator.CodebaseIdentifier.identify_codebase(workspace_path) do
+            %{canonical_id: canonical_id} -> canonical_id
+            _ -> Path.basename(workspace_path || "default")
+          end
+
+        nil ->
+          "default"
+
+        explicit_id ->
+          # Normalize the provided ID  
+          AgentCoordinator.CodebaseIdentifier.normalize_codebase_reference(
+            explicit_id,
+            workspace_path
+          )
+      end
+
+    # Determine role based on capabilities
+    role = determine_role(capabilities)
+
     %__MODULE__{
       id: UUID.uuid4(),
       name: name,
       capabilities: capabilities,
       status: :idle,
       current_task_id: nil,
-      codebase_id: Keyword.get(opts, :codebase_id, "default"),
-      workspace_path: Keyword.get(opts, :workspace_path),
+      codebase_id: codebase_id,
+      workspace_path: workspace_path,
       last_heartbeat: DateTime.utc_now(),
-      metadata: Keyword.get(opts, :metadata, %{})
+      metadata: Keyword.get(opts, :metadata, %{}),
+      current_activity: nil,
+      current_files: [],
+      activity_history: [],
+      role: role,
+      managed_agents: [],
+      oversight_scope:
+        if(role == :director, do: Keyword.get(opts, :oversight_scope, :codebase), else: :codebase)
     }
   end
 
@@ -60,6 +120,31 @@ defmodule AgentCoordinator.Agent do
     %{agent | last_heartbeat: DateTime.utc_now()}
   end
 
+  def update_activity(agent, activity, files \\ []) do
+    # Add to activity history (keep last 10 activities)
+    activity_entry = %{
+      activity: activity,
+      files: files,
+      timestamp: DateTime.utc_now()
+    }
+
+    new_history =
+      [activity_entry | agent.activity_history]
+      |> Enum.take(10)
+
+    %{
+      agent
+      | current_activity: activity,
+        current_files: files,
+        activity_history: new_history,
+        last_heartbeat: DateTime.utc_now()
+    }
+  end
+
+  def clear_activity(agent) do
+    %{agent | current_activity: nil, current_files: [], last_heartbeat: DateTime.utc_now()}
+  end
+
   def assign_task(agent, task_id) do
     %{agent | status: :busy, current_task_id: task_id}
   end
@@ -93,4 +178,55 @@ defmodule AgentCoordinator.Agent do
   def can_work_cross_codebase?(agent) do
     Map.get(agent.metadata, :cross_codebase_capable, false)
   end
+
+  # Director-specific functions
+
+  def is_director?(agent) do
+    agent.role == :director
+  end
+
+  def is_manager?(agent) do
+    agent.role in [:director, :project_manager]
+  end
+
+  def can_manage_agent?(director, target_agent) do
+    case director.oversight_scope do
+      :global -> true
+      :codebase -> director.codebase_id == target_agent.codebase_id
+    end
+  end
+
+  def add_managed_agent(director, agent_id) do
+    if is_manager?(director) do
+      managed_agents = [agent_id | director.managed_agents] |> Enum.uniq()
+      %{director | managed_agents: managed_agents}
+    else
+      director
+    end
+  end
+
+  def remove_managed_agent(director, agent_id) do
+    if is_manager?(director) do
+      managed_agents = director.managed_agents |> Enum.reject(&(&1 == agent_id))
+      %{director | managed_agents: managed_agents}
+    else
+      director
+    end
+  end
+
+  # Private helper to determine role from capabilities
+  defp determine_role(capabilities) do
+    management_caps = [:management, :coordination, :oversight]
+
+    cond do
+      Enum.any?(management_caps, &(&1 in capabilities)) and :oversight in capabilities ->
+        :director
+
+      :management in capabilities ->
+        :project_manager
+
+      true ->
+        :standard
+    end
+  end
 end

lib/agent_coordinator/application.ex

@@ -24,9 +24,15 @@ defmodule AgentCoordinator.Application do
       # Task registry with NATS integration (conditionally add persistence)
       {AgentCoordinator.TaskRegistry, nats: if(enable_persistence, do: nats_config(), else: nil)},
 
+      # Session manager for MCP session token handling
+      AgentCoordinator.SessionManager,
+
       # Unified MCP server (includes external server management, session tracking, and auto-registration)
       AgentCoordinator.MCPServer,
 
+      # Interface manager for multiple MCP interface modes
+      AgentCoordinator.InterfaceManager,
+
       # Auto-heartbeat manager
       AgentCoordinator.AutoHeartbeat,
 

lib/agent_coordinator/codebase_identifier.ex

@@ -0,0 +1,326 @@
+defmodule AgentCoordinator.CodebaseIdentifier do
+  @moduledoc """
+  Smart codebase identification system that works across local and remote scenarios.
+
+  Generates canonical codebase identifiers using multiple strategies:
+  1. Git repository detection (preferred)
+  2. Local folder name fallback
+  3. Remote workspace mapping
+  4. Custom identifier override
+  """
+
+  require Logger
+
+  @type codebase_info :: %{
+          canonical_id: String.t(),
+          display_name: String.t(),
+          workspace_path: String.t(),
+          repository_url: String.t() | nil,
+          git_remote: String.t() | nil,
+          branch: String.t() | nil,
+          commit_hash: String.t() | nil,
+          identification_method: :git_remote | :git_local | :folder_name | :custom
+        }
+
+  @doc """
+  Identify a codebase from a workspace path, generating a canonical ID.
+
+  Priority order:
+  1. Git remote URL (most reliable for distributed teams)
+  2. Git local repository info
+  3. Folder name (fallback for non-git projects)
+  4. Custom override from metadata
+
+  ## Examples
+
+      # Git repository with remote
+      iex> identify_codebase("/home/user/my-project")
+      %{
+        canonical_id: "github.com/owner/my-project",
+        display_name: "my-project",
+        workspace_path: "/home/user/my-project",
+        repository_url: "https://github.com/owner/my-project.git",
+        git_remote: "origin",
+        branch: "main",
+        identification_method: :git_remote
+      }
+
+      # Local folder (no git)
+      iex> identify_codebase("/home/user/local-project")
+      %{
+        canonical_id: "local:/home/user/local-project",
+        display_name: "local-project",
+        workspace_path: "/home/user/local-project",
+        repository_url: nil,
+        identification_method: :folder_name
+      }
+  """
+  def identify_codebase(workspace_path, opts \\ [])
+
+  def identify_codebase(nil, opts) do
+    custom_id = Keyword.get(opts, :custom_id, "default")
+    build_custom_codebase_info(nil, custom_id)
+  end
+
+  def identify_codebase(workspace_path, opts) do
+    custom_id = Keyword.get(opts, :custom_id)
+
+    cond do
+      custom_id ->
+        build_custom_codebase_info(workspace_path, custom_id)
+
+      git_repository?(workspace_path) ->
+        identify_git_codebase(workspace_path)
+
+      true ->
+        identify_folder_codebase(workspace_path)
+    end
+  end
+
+  @doc """
+  Normalize different codebase references to canonical IDs.
+  Handles cases where agents specify different local paths for same repository.
+  """
+  def normalize_codebase_reference(codebase_ref, workspace_path) do
+    case codebase_ref do
+      # Already canonical
+      id when is_binary(id) ->
+        if String.contains?(id, ".com/") or String.starts_with?(id, "local:") do
+          id
+        else
+          # Folder name - try to resolve to canonical
+          case identify_codebase(workspace_path) do
+            %{canonical_id: canonical_id} -> canonical_id
+            _ -> "local:#{id}"
+          end
+        end
+
+      _ ->
+        # Fallback to folder-based ID
+        Path.basename(workspace_path || "/unknown")
+    end
+  end
+
+  @doc """
+  Check if two workspace paths refer to the same codebase.
+  Useful for detecting when agents from different machines work on same project.
+  """
+  def same_codebase?(workspace_path1, workspace_path2) do
+    info1 = identify_codebase(workspace_path1)
+    info2 = identify_codebase(workspace_path2)
+
+    info1.canonical_id == info2.canonical_id
+  end
+
+  # Private functions
+
+  defp build_custom_codebase_info(workspace_path, custom_id) do
+    %{
+      canonical_id: custom_id,
+      display_name: custom_id,
+      workspace_path: workspace_path,
+      repository_url: nil,
+      git_remote: nil,
+      branch: nil,
+      commit_hash: nil,
+      identification_method: :custom
+    }
+  end
+
+  defp identify_git_codebase(workspace_path) do
+    with {:ok, git_info} <- get_git_info(workspace_path) do
+      canonical_id =
+        case git_info.remote_url do
+          nil ->
+            # Local git repo without remote
+            "git-local:#{git_info.repo_name}"
+
+          remote_url ->
+            # Extract canonical identifier from remote URL
+            extract_canonical_from_remote(remote_url)
+        end
+
+      %{
+        canonical_id: canonical_id,
+        display_name: git_info.repo_name,
+        workspace_path: workspace_path,
+        repository_url: git_info.remote_url,
+        git_remote: git_info.remote_name,
+        branch: git_info.branch,
+        commit_hash: git_info.commit_hash,
+        identification_method: if(git_info.remote_url, do: :git_remote, else: :git_local)
+      }
+    else
+      _ ->
+        identify_folder_codebase(workspace_path)
+    end
+  end
+
+  defp identify_folder_codebase(workspace_path) when is_nil(workspace_path) do
+    %{
+      canonical_id: "default",
+      display_name: "default",
+      workspace_path: nil,
+      repository_url: nil,
+      git_remote: nil,
+      branch: nil,
+      commit_hash: nil,
+      identification_method: :folder_name
+    }
+  end
+
+  defp identify_folder_codebase(workspace_path) do
+    folder_name = Path.basename(workspace_path)
+
+    %{
+      canonical_id: "local:#{workspace_path}",
+      display_name: folder_name,
+      workspace_path: workspace_path,
+      repository_url: nil,
+      git_remote: nil,
+      branch: nil,
+      commit_hash: nil,
+      identification_method: :folder_name
+    }
+  end
+
+  defp git_repository?(workspace_path) when is_nil(workspace_path), do: false
+
+  defp git_repository?(workspace_path) do
+    File.exists?(Path.join(workspace_path, ".git"))
+  end
+
+  defp get_git_info(workspace_path) do
+    try do
+      # Get repository name
+      repo_name = Path.basename(workspace_path)
+
+      # Get current branch
+      {branch, 0} = System.cmd("git", ["branch", "--show-current"], cd: workspace_path)
+      branch = String.trim(branch)
+
+      # Get current commit
+      {commit_hash, 0} = System.cmd("git", ["rev-parse", "HEAD"], cd: workspace_path)
+      commit_hash = String.trim(commit_hash)
+
+      # Try to get remote URL
+      {remote_info, _remote_result_use_me?} =
+        case System.cmd("git", ["remote", "-v"], cd: workspace_path) do
+          {output, 0} when output != "" ->
+            # Parse remote output to extract origin URL
+            lines = String.split(String.trim(output), "\n")
+
+            origin_line =
+              Enum.find(lines, fn line ->
+                String.starts_with?(line, "origin") and String.contains?(line, "(fetch)")
+              end)
+
+            case origin_line do
+              nil ->
+                {nil, :no_origin}
+
+              line ->
+                # Extract URL from "origin <url> (fetch)"
+                url =
+                  line
+                  |> String.split()
+                  |> Enum.at(1)
+
+                {url, :ok}
+            end
+
+          _ ->
+            {nil, :no_remotes}
+        end
+
+      git_info = %{
+        repo_name: repo_name,
+        branch: branch,
+        commit_hash: commit_hash,
+        remote_url: remote_info,
+        remote_name: if(remote_info, do: "origin", else: nil)
+      }
+
+      {:ok, git_info}
+    rescue
+      _ -> {:error, :git_command_failed}
+    end
+  end
+
+  defp extract_canonical_from_remote(remote_url) do
+    cond do
+      # GitHub HTTPS
+      String.contains?(remote_url, "github.com") ->
+        extract_github_id(remote_url)
+
+      # GitLab HTTPS
+      String.contains?(remote_url, "gitlab.com") ->
+        extract_gitlab_id(remote_url)
+
+      # SSH format
+      String.contains?(remote_url, "@") and String.contains?(remote_url, ":") ->
+        extract_ssh_id(remote_url)
+
+      # Other HTTPS
+      String.starts_with?(remote_url, "https://") ->
+        extract_https_id(remote_url)
+
+      true ->
+        # Fallback - use raw URL
+        "remote:#{remote_url}"
+    end
+  end
+
+  defp extract_github_id(url) do
+    # Extract "owner/repo" from various GitHub URL formats
+    regex = ~r/github\.com[\/:]([^\/]+)\/([^\/\.]+)/
+
+    case Regex.run(regex, url) do
+      [_, owner, repo] ->
+        "github.com/#{owner}/#{repo}"
+
+      _ ->
+        "github.com/unknown"
+    end
+  end
+
+  defp extract_gitlab_id(url) do
+    # Similar logic for GitLab
+    regex = ~r/gitlab\.com[\/:]([^\/]+)\/([^\/\.]+)/
+
+    case Regex.run(regex, url) do
+      [_, owner, repo] ->
+        "gitlab.com/#{owner}/#{repo}"
+
+      _ ->
+        "gitlab.com/unknown"
+    end
+  end
+
+  defp extract_ssh_id(url) do
+    # SSH format: git@host:owner/repo.git
+    case String.split(url, ":") do
+      [host_part, path_part] ->
+        host = String.replace(host_part, ~r/.*@/, "")
+        path = String.replace(path_part, ".git", "")
+        "#{host}/#{path}"
+
+      _ ->
+        "ssh:#{url}"
+    end
+  end
+
+  defp extract_https_id(url) do
+    # Extract from general HTTPS URLs
+    uri = URI.parse(url)
+    host = uri.host
+    path = String.replace(uri.path || "", ~r/^\//, "")
+    path = String.replace(path, ".git", "")
+
+    if host && path != "" do
+      "#{host}/#{path}"
+    else
+      "https:#{url}"
+    end
+  end
+end

lib/agent_coordinator/http_interface.ex

@@ -0,0 +1,637 @@
+defmodule AgentCoordinator.HttpInterface do
+  @moduledoc """
+  HTTP and WebSocket interface for the Agent Coordinator MCP server.
+
+  This module provides:
+  - HTTP REST API for MCP requests
+  - WebSocket support for real-time communication
+  - Remote client detection and tool filtering
+  - CORS support for web clients
+  - Session management across HTTP requests
+  """
+
+  use Plug.Router
+  require Logger
+  alias AgentCoordinator.{MCPServer, ToolFilter, SessionManager}
+
+  plug(Plug.Logger)
+  plug(:match)
+  plug(Plug.Parsers, parsers: [:json], json_decoder: Jason)
+  plug(:put_cors_headers)
+  plug(:dispatch)
+
+  @doc """
+  Start the HTTP server on the specified port.
+  """
+  def start_link(opts \\ []) do
+    port = Keyword.get(opts, :port, 8080)
+
+    IO.puts(:stderr, "Starting Agent Coordinator HTTP interface on port #{port}")
+
+    Plug.Cowboy.http(__MODULE__, [],
+      port: port,
+      dispatch: cowboy_dispatch()
+    )
+  end
+
+  # HTTP Routes
+
+  get "/health" do
+    send_json_response(conn, 200, %{
+      status: "healthy",
+      service: "agent-coordinator",
+      version: AgentCoordinator.version(),
+      timestamp: DateTime.utc_now()
+    })
+  end
+
+  get "/mcp/capabilities" do
+    context = extract_client_context(conn)
+
+    # Get filtered tools based on client context
+    all_tools = MCPServer.get_tools()
+    filtered_tools = ToolFilter.filter_tools(all_tools, context)
+
+    capabilities = %{
+      protocolVersion: "2024-11-05",
+      serverInfo: %{
+        name: "agent-coordinator-http",
+        version: AgentCoordinator.version(),
+        description: "Agent Coordinator HTTP/WebSocket interface"
+      },
+      capabilities: %{
+        tools: %{},
+        coordination: %{
+          automatic_task_tracking: true,
+          agent_management: true,
+          multi_server_proxy: true,
+          heartbeat_coverage: true,
+          session_tracking: true,
+          tool_filtering: true
+        }
+      },
+      tools: filtered_tools,
+      context: %{
+        connection_type: context.connection_type,
+        security_level: context.security_level,
+        tool_count: length(filtered_tools)
+      }
+    }
+
+    send_json_response(conn, 200, capabilities)
+  end
+
+  get "/mcp/tools" do
+    context = extract_client_context(conn)
+    all_tools = MCPServer.get_tools()
+    filtered_tools = ToolFilter.filter_tools(all_tools, context)
+
+    filter_stats = ToolFilter.get_filter_stats(all_tools, context)
+
+    response = %{
+      tools: filtered_tools,
+      _meta: %{
+        filter_stats: filter_stats,
+        context: %{
+          connection_type: context.connection_type,
+          security_level: context.security_level
+        }
+      }
+    }
+
+    send_json_response(conn, 200, response)
+  end
+
+  post "/mcp/tools/:tool_name" do
+    context = extract_client_context(conn)
+
+    # Check if tool is allowed for this client
+    all_tools = MCPServer.get_tools()
+    filtered_tools = ToolFilter.filter_tools(all_tools, context)
+
+    tool_allowed =
+      Enum.any?(filtered_tools, fn tool ->
+        Map.get(tool, "name") == tool_name
+      end)
+
+    if not tool_allowed do
+      send_json_response(conn, 403, %{
+        error: %{
+          code: -32601,
+          message: "Tool not available for remote clients: #{tool_name}",
+          data: %{
+            available_tools: Enum.map(filtered_tools, &Map.get(&1, "name")),
+            connection_type: context.connection_type
+          }
+        }
+      })
+    else
+      # Execute the tool call
+      args = Map.get(conn.body_params, "arguments", %{})
+
+      # Create MCP request format
+      mcp_request = %{
+        "jsonrpc" => "2.0",
+        "id" => Map.get(conn.body_params, "id", generate_request_id()),
+        "method" => "tools/call",
+        "params" => %{
+          "name" => tool_name,
+          "arguments" => args
+        }
+      }
+
+      # Add session tracking
+      mcp_request = add_session_info(mcp_request, conn, context)
+
+      # Execute through MCP server
+      case MCPServer.handle_mcp_request(mcp_request) do
+        %{"result" => result} ->
+          send_json_response(conn, 200, %{
+            result: result,
+            _meta: %{
+              tool_name: tool_name,
+              request_id: mcp_request["id"],
+              context: context.connection_type
+            }
+          })
+
+        %{"error" => error} ->
+          send_json_response(conn, 400, %{error: error})
+
+        unexpected ->
+          IO.puts(:stderr, "Unexpected MCP response: #{inspect(unexpected)}")
+
+          send_json_response(conn, 500, %{
+            error: %{
+              code: -32603,
+              message: "Internal server error"
+            }
+          })
+      end
+    end
+  end
+
+  post "/mcp/request" do
+    context = extract_client_context(conn)
+
+    # Validate MCP request format
+    case validate_mcp_request(conn.body_params) do
+      {:ok, mcp_request} ->
+        method = Map.get(mcp_request, "method")
+
+        # Validate session for this method
+        case validate_session_for_method(method, conn, context) do
+          {:ok, _session_info} ->
+            # Add session tracking
+            enhanced_request = add_session_info(mcp_request, conn, context)
+
+            # For tool calls, check tool filtering
+            case method do
+              "tools/call" ->
+                tool_name = get_in(enhanced_request, ["params", "name"])
+
+                if tool_allowed_for_context?(tool_name, context) do
+                  execute_mcp_request(conn, enhanced_request, context)
+                else
+                  send_json_response(conn, 403, %{
+                    jsonrpc: "2.0",
+                    id: Map.get(enhanced_request, "id"),
+                    error: %{
+                      code: -32601,
+                      message: "Tool not available: #{tool_name}"
+                    }
+                  })
+                end
+
+              "tools/list" ->
+                # Override tools/list to return filtered tools
+                handle_filtered_tools_list(conn, enhanced_request, context)
+
+              _ ->
+                # Other methods pass through normally
+                execute_mcp_request(conn, enhanced_request, context)
+            end
+
+          {:error, auth_error} ->
+            send_json_response(conn, 401, %{
+              jsonrpc: "2.0",
+              id: Map.get(mcp_request, "id"),
+              error: auth_error
+            })
+        end
+
+      {:error, reason} ->
+        send_json_response(conn, 400, %{
+          jsonrpc: "2.0",
+          id: Map.get(conn.body_params, "id"),
+          error: %{
+            code: -32700,
+            message: "Invalid request: #{reason}"
+          }
+        })
+    end
+  end
+
+  get "/mcp/ws" do
+    conn
+    |> WebSockAdapter.upgrade(AgentCoordinator.WebSocketHandler, %{}, timeout: 60_000)
+  end
+
+  get "/agents" do
+    context = extract_client_context(conn)
+
+    # Only allow agent status for authorized clients
+    case context.security_level do
+      level when level in [:trusted, :sandboxed] ->
+        mcp_request = %{
+          "jsonrpc" => "2.0",
+          "id" => generate_request_id(),
+          "method" => "tools/call",
+          "params" => %{
+            "name" => "get_task_board",
+            "arguments" => %{"agent_id" => "http_interface"}
+          }
+        }
+
+        case MCPServer.handle_mcp_request(mcp_request) do
+          %{"result" => %{"content" => [%{"text" => text}]}} ->
+            data = Jason.decode!(text)
+            send_json_response(conn, 200, data)
+
+          %{"error" => error} ->
+            send_json_response(conn, 500, %{error: error})
+        end
+
+      _ ->
+        send_json_response(conn, 403, %{
+          error: "Insufficient privileges to view agent status"
+        })
+    end
+  end
+
+  # Server-Sent Events (SSE) endpoint for real-time MCP streaming.
+  # Implements MCP Streamable HTTP transport for live updates.
+  get "/mcp/stream" do
+    context = extract_client_context(conn)
+
+    # Validate session for SSE stream
+    case validate_session_for_method("stream/subscribe", conn, context) do
+      {:ok, session_info} ->
+        # Set up SSE headers
+        conn =
+          conn
+          |> put_resp_content_type("text/event-stream")
+          |> put_mcp_headers()
+          |> put_resp_header("cache-control", "no-cache")
+          |> put_resp_header("connection", "keep-alive")
+          |> put_resp_header("access-control-allow-credentials", "true")
+          |> send_chunked(200)
+
+        # Send initial connection event
+        {:ok, conn} =
+          chunk(
+            conn,
+            format_sse_event("connected", %{
+              session_id: Map.get(session_info, :agent_id, "anonymous"),
+              protocol_version: "2025-06-18",
+              timestamp: DateTime.utc_now() |> DateTime.to_iso8601()
+            })
+          )
+
+        # Start streaming loop
+        stream_mcp_events(conn, session_info, context)
+
+      {:error, auth_error} ->
+        send_json_response(conn, 401, auth_error)
+    end
+  end
+
+  defp stream_mcp_events(conn, session_info, context) do
+    # This is a basic implementation - in production you'd want to:
+    # 1. Subscribe to a GenServer/PubSub for real-time events
+    # 2. Handle client disconnections gracefully
+    # 3. Implement proper backpressure
+
+    # Send periodic heartbeat for now
+    try do
+      :timer.sleep(1000)
+
+      {:ok, conn} =
+        chunk(
+          conn,
+          format_sse_event("heartbeat", %{
+            timestamp: DateTime.utc_now() |> DateTime.to_iso8601(),
+            session_id: Map.get(session_info, :agent_id, "anonymous")
+          })
+        )
+
+      # Continue streaming (this would be event-driven in production)
+      stream_mcp_events(conn, session_info, context)
+    rescue
+      # Client disconnected
+      _ ->
+        IO.puts(:stderr, "SSE client disconnected")
+        conn
+    end
+  end
+
+  defp format_sse_event(event_type, data) do
+    "event: #{event_type}\ndata: #{Jason.encode!(data)}\n\n"
+  end
+
+  # Catch-all for unmatched routes
+  match _ do
+    send_json_response(conn, 404, %{
+      error: "Not found",
+      available_endpoints: [
+        "GET /health",
+        "GET /mcp/capabilities",
+        "GET /mcp/tools",
+        "POST /mcp/tools/:tool_name",
+        "POST /mcp/request",
+        "GET /mcp/stream (SSE)",
+        "GET /mcp/ws",
+        "GET /agents"
+      ]
+    })
+  end
+
+  # Private helper functions
+
+  defp cowboy_dispatch do
+    [
+      {:_,
+       [
+         {"/mcp/ws", AgentCoordinator.WebSocketHandler, []},
+         {:_, Plug.Cowboy.Handler, {__MODULE__, []}}
+       ]}
+    ]
+  end
+
+  defp extract_client_context(conn) do
+    remote_ip = get_remote_ip(conn)
+    user_agent = get_req_header(conn, "user-agent") |> List.first()
+    origin = get_req_header(conn, "origin") |> List.first()
+
+    connection_info = %{
+      transport: :http,
+      remote_ip: remote_ip,
+      user_agent: user_agent,
+      origin: origin,
+      secure: conn.scheme == :https,
+      headers: conn.req_headers
+    }
+
+    ToolFilter.detect_client_context(connection_info)
+  end
+
+  defp get_remote_ip(conn) do
+    # Check for forwarded headers first (for reverse proxies)
+    forwarded_for = get_req_header(conn, "x-forwarded-for") |> List.first()
+    real_ip = get_req_header(conn, "x-real-ip") |> List.first()
+
+    cond do
+      forwarded_for ->
+        forwarded_for |> String.split(",") |> List.first() |> String.trim()
+
+      real_ip ->
+        real_ip
+
+      true ->
+        conn.remote_ip |> :inet.ntoa() |> to_string()
+    end
+  end
+
+  defp put_cors_headers(conn, _opts) do
+    # Validate origin for enhanced security
+    origin = get_req_header(conn, "origin") |> List.first()
+    allowed_origin = validate_origin(origin)
+
+    conn
+    |> put_resp_header("access-control-allow-origin", allowed_origin)
+    |> put_resp_header("access-control-allow-methods", "GET, POST, OPTIONS")
+    |> put_resp_header(
+      "access-control-allow-headers",
+      "content-type, authorization, mcp-session-id, mcp-protocol-version, x-session-id"
+    )
+    |> put_resp_header("access-control-expose-headers", "mcp-protocol-version, server")
+    |> put_resp_header("access-control-max-age", "86400")
+  end
+
+  # No origin header (direct API calls)
+  defp validate_origin(nil), do: "*"
+
+  defp validate_origin(origin) do
+    # Allow localhost and development origins
+    case URI.parse(origin) do
+      %URI{host: host} when host in ["localhost", "127.0.0.1", "::1"] ->
+        origin
+
+      %URI{host: host} when is_binary(host) ->
+        # Allow HTTPS origins and known development domains
+        if String.starts_with?(origin, "https://") or
+             String.contains?(host, ["localhost", "127.0.0.1", "dev", "local"]) do
+          origin
+        else
+          # For production, be more restrictive
+          IO.puts(:stderr, "Potentially unsafe origin: #{origin}")
+          # Fallback for now, could be more restrictive
+          "*"
+        end
+
+      _ ->
+        "*"
+    end
+  end
+
+  defp send_json_response(conn, status, data) do
+    conn
+    |> put_resp_content_type("application/json")
+    |> put_mcp_headers()
+    |> send_resp(status, Jason.encode!(data))
+  end
+
+  defp put_mcp_headers(conn) do
+    conn
+    |> put_resp_header("mcp-protocol-version", "2025-06-18")
+    |> put_resp_header("server", "AgentCoordinator/1.0")
+  end
+
+  defp validate_mcp_request(params) when is_map(params) do
+    required_fields = ["jsonrpc", "method"]
+
+    missing_fields =
+      Enum.filter(required_fields, fn field ->
+        not Map.has_key?(params, field)
+      end)
+
+    cond do
+      not Enum.empty?(missing_fields) ->
+        {:error, "Missing required fields: #{Enum.join(missing_fields, ", ")}"}
+
+      Map.get(params, "jsonrpc") != "2.0" ->
+        {:error, "Invalid jsonrpc version, must be '2.0'"}
+
+      not is_binary(Map.get(params, "method")) ->
+        {:error, "Method must be a string"}
+
+      true ->
+        {:ok, params}
+    end
+  end
+
+  defp validate_mcp_request(_), do: {:error, "Request must be a JSON object"}
+
+  defp add_session_info(mcp_request, conn, context) do
+    # Extract and validate MCP session token
+    {session_id, session_info} = get_session_info(conn)
+
+    # Add context metadata to request params
+    enhanced_params =
+      Map.get(mcp_request, "params", %{})
+      |> Map.put("_session_id", session_id)
+      |> Map.put("_session_info", session_info)
+      |> Map.put("_client_context", %{
+        connection_type: context.connection_type,
+        security_level: context.security_level,
+        remote_ip: get_remote_ip(conn),
+        user_agent: context.user_agent
+      })
+
+    Map.put(mcp_request, "params", enhanced_params)
+  end
+
+  defp get_session_info(conn) do
+    # Check for MCP-Session-Id header (MCP compliant)
+    case get_req_header(conn, "mcp-session-id") do
+      [session_token] when byte_size(session_token) > 0 ->
+        case SessionManager.validate_session(session_token) do
+          {:ok, session_info} ->
+            {session_info.agent_id,
+             %{
+               token: session_token,
+               agent_id: session_info.agent_id,
+               capabilities: session_info.capabilities,
+               expires_at: session_info.expires_at,
+               validated: true
+             }}
+
+          {:error, reason} ->
+            IO.puts(:stderr, "Invalid MCP session token: #{reason}")
+            # Fall back to generating anonymous session
+            anonymous_id =
+              "http_anonymous_" <> (:crypto.strong_rand_bytes(8) |> Base.encode16(case: :lower))
+
+            {anonymous_id, %{validated: false, reason: reason}}
+        end
+
+      [] ->
+        # Check legacy X-Session-Id header for backward compatibility
+        case get_req_header(conn, "x-session-id") do
+          [session_id] when byte_size(session_id) > 0 ->
+            {session_id, %{validated: false, legacy: true}}
+
+          _ ->
+            # No session header, generate anonymous session
+            anonymous_id =
+              "http_anonymous_" <> (:crypto.strong_rand_bytes(8) |> Base.encode16(case: :lower))
+
+            {anonymous_id, %{validated: false, anonymous: true}}
+        end
+    end
+  end
+
+  defp require_authenticated_session(conn, _context) do
+    {_session_id, session_info} = get_session_info(conn)
+
+    case Map.get(session_info, :validated, false) do
+      true ->
+        {:ok, session_info}
+
+      false ->
+        reason = Map.get(session_info, :reason, "Session not authenticated")
+
+        {:error,
+         %{
+           code: -32001,
+           message: "Authentication required",
+           data: %{reason: reason}
+         }}
+    end
+  end
+
+  defp validate_session_for_method(method, conn, context) do
+    # Define which methods require authenticated sessions
+    authenticated_methods =
+      MapSet.new([
+        "agents/register",
+        "agents/unregister",
+        "agents/heartbeat",
+        "tasks/create",
+        "tasks/complete",
+        "codebase/register",
+        "stream/subscribe"
+      ])
+
+    if MapSet.member?(authenticated_methods, method) do
+      require_authenticated_session(conn, context)
+    else
+      {:ok, %{anonymous: true}}
+    end
+  end
+
+  defp tool_allowed_for_context?(tool_name, context) do
+    all_tools = MCPServer.get_tools()
+    filtered_tools = ToolFilter.filter_tools(all_tools, context)
+
+    Enum.any?(filtered_tools, fn tool ->
+      Map.get(tool, "name") == tool_name
+    end)
+  end
+
+  defp execute_mcp_request(conn, mcp_request, _context) do
+    case MCPServer.handle_mcp_request(mcp_request) do
+      %{"result" => _} = response ->
+        send_json_response(conn, 200, response)
+
+      %{"error" => _} = response ->
+        send_json_response(conn, 400, response)
+
+      unexpected ->
+        IO.puts(:stderr, "Unexpected MCP response: #{inspect(unexpected)}")
+
+        send_json_response(conn, 500, %{
+          jsonrpc: "2.0",
+          id: Map.get(mcp_request, "id"),
+          error: %{
+            code: -32603,
+            message: "Internal server error"
+          }
+        })
+    end
+  end
+
+  defp handle_filtered_tools_list(conn, mcp_request, context) do
+    all_tools = MCPServer.get_tools()
+    filtered_tools = ToolFilter.filter_tools(all_tools, context)
+
+    response = %{
+      "jsonrpc" => "2.0",
+      "id" => Map.get(mcp_request, "id"),
+      "result" => %{
+        "tools" => filtered_tools,
+        "_meta" => %{
+          "filtered_for" => context.connection_type,
+          "original_count" => length(all_tools),
+          "filtered_count" => length(filtered_tools)
+        }
+      }
+    }
+
+    send_json_response(conn, 200, response)
+  end
+
+  defp generate_request_id do
+    "http_req_" <> (:crypto.strong_rand_bytes(8) |> Base.encode16(case: :lower))
+  end
+end

lib/agent_coordinator/inbox.ex

@@ -32,6 +32,10 @@ defmodule AgentCoordinator.Inbox do
     GenServer.call(via_tuple(agent_id), {:add_task, task}, 30_000)
   end
 
+  def remove_task(agent_id, task_id) do
+    GenServer.call(via_tuple(agent_id), {:remove_task, task_id}, 30_000)
+  end
+
   def get_next_task(agent_id) do
     GenServer.call(via_tuple(agent_id), :get_next_task, 15_000)
   end
@@ -92,6 +96,47 @@ defmodule AgentCoordinator.Inbox do
     {:reply, :ok, new_state}
   end
 
+  def handle_call({:remove_task, task_id}, _from, state) do
+    # Remove task from pending tasks
+    {removed_task, remaining_pending} =
+      Enum.reduce(state.pending_tasks, {nil, []}, fn task, {found_task, acc} ->
+        if task.id == task_id do
+          {task, acc}
+        else
+          {found_task, [task | acc]}
+        end
+      end)
+
+    # Check if task is currently in progress
+    {new_in_progress, removed_from_progress} =
+      if state.in_progress_task && state.in_progress_task.id == task_id do
+        {nil, state.in_progress_task}
+      else
+        {state.in_progress_task, nil}
+      end
+
+    final_removed_task = removed_task || removed_from_progress
+
+    if final_removed_task do
+      new_state = %{
+        state
+        | pending_tasks: Enum.reverse(remaining_pending),
+          in_progress_task: new_in_progress
+      }
+
+      # Broadcast task removed
+      Phoenix.PubSub.broadcast(
+        AgentCoordinator.PubSub,
+        "agent:#{state.agent_id}",
+        {:task_removed, final_removed_task}
+      )
+
+      {:reply, :ok, new_state}
+    else
+      {:reply, {:error, :task_not_found}, state}
+    end
+  end
+
   def handle_call(:get_next_task, _from, state) do
     case state.pending_tasks do
       [] ->

lib/agent_coordinator/interface_manager.ex

@@ -0,0 +1,718 @@
+defmodule AgentCoordinator.InterfaceManager do
+  @moduledoc """
+  Centralized manager for multiple MCP interface modes.
+
+  This module coordinates between different interface types:
+  - STDIO interface (for local MCP clients like VSCode)
+  - HTTP REST interface (for remote API access)
+  - WebSocket interface (for real-time web clients)
+
+  Responsibilities:
+  - Start/stop interface servers based on configuration
+  - Coordinate session state across interfaces
+  - Apply appropriate tool filtering per interface
+  - Monitor interface health and restart if needed
+  - Provide unified metrics and monitoring
+  """
+
+  use GenServer
+  require Logger
+  alias AgentCoordinator.{HttpInterface, ToolFilter}
+
+  defstruct [
+    :config,
+    :interfaces,
+    :stdio_handler,
+    :session_registry,
+    :metrics
+  ]
+
+  @interface_types [:stdio, :http, :websocket]
+
+  # Client API
+
+  @doc """
+  Start the interface manager with configuration.
+  """
+  def start_link(opts \\ []) do
+    GenServer.start_link(__MODULE__, opts, name: __MODULE__)
+  end
+
+  @doc """
+  Get current interface status.
+  """
+  def get_status do
+    GenServer.call(__MODULE__, :get_status)
+  end
+
+  @doc """
+  Start a specific interface type.
+  """
+  def start_interface(interface_type, opts \\ []) do
+    GenServer.call(__MODULE__, {:start_interface, interface_type, opts})
+  end
+
+  @doc """
+  Stop a specific interface type.
+  """
+  def stop_interface(interface_type) do
+    GenServer.call(__MODULE__, {:stop_interface, interface_type})
+  end
+
+  @doc """
+  Restart an interface.
+  """
+  def restart_interface(interface_type) do
+    GenServer.call(__MODULE__, {:restart_interface, interface_type})
+  end
+
+  @doc """
+  Get metrics for all interfaces.
+  """
+  def get_metrics do
+    GenServer.call(__MODULE__, :get_metrics)
+  end
+
+  @doc """
+  Register a session across interfaces.
+  """
+  def register_session(session_id, interface_type, session_info) do
+    GenServer.cast(__MODULE__, {:register_session, session_id, interface_type, session_info})
+  end
+
+  @doc """
+  Unregister a session.
+  """
+  def unregister_session(session_id) do
+    GenServer.cast(__MODULE__, {:unregister_session, session_id})
+  end
+
+  # Server callbacks
+
+  @impl GenServer
+  def init(opts) do
+    # Load configuration
+    config = load_interface_config(opts)
+
+    state = %__MODULE__{
+      config: config,
+      interfaces: %{},
+      stdio_handler: nil,
+      session_registry: %{},
+      metrics: initialize_metrics()
+    }
+
+    IO.puts(
+      :stderr,
+      "Interface Manager starting with config: #{inspect(config.enabled_interfaces)}"
+    )
+
+    # Start enabled interfaces
+    {:ok, state, {:continue, :start_interfaces}}
+  end
+
+  @impl GenServer
+  def handle_continue(:start_interfaces, state) do
+    # Start each enabled interface
+    updated_state =
+      Enum.reduce(state.config.enabled_interfaces, state, fn interface_type, acc ->
+        case start_interface_server(interface_type, state.config, acc) do
+          {:ok, interface_info} ->
+            IO.puts(:stderr, "Started #{interface_type} interface")
+            %{acc | interfaces: Map.put(acc.interfaces, interface_type, interface_info)}
+
+          {:error, reason} ->
+            IO.puts(:stderr, "Failed to start #{interface_type} interface: #{reason}")
+            acc
+        end
+      end)
+
+    {:noreply, updated_state}
+  end
+
+  @impl GenServer
+  def handle_call(:get_status, _from, state) do
+    status = %{
+      enabled_interfaces: state.config.enabled_interfaces,
+      running_interfaces: Map.keys(state.interfaces),
+      active_sessions: map_size(state.session_registry),
+      config: %{
+        stdio: state.config.stdio,
+        http: state.config.http,
+        websocket: state.config.websocket
+      },
+      uptime: get_uptime(),
+      metrics: state.metrics
+    }
+
+    {:reply, status, state}
+  end
+
+  @impl GenServer
+  def handle_call({:start_interface, interface_type, opts}, _from, state) do
+    if interface_type in @interface_types do
+      case start_interface_server(interface_type, state.config, state, opts) do
+        {:ok, interface_info} ->
+          updated_interfaces = Map.put(state.interfaces, interface_type, interface_info)
+          updated_state = %{state | interfaces: updated_interfaces}
+
+          IO.puts(:stderr, "Started #{interface_type} interface on demand")
+          {:reply, {:ok, interface_info}, updated_state}
+
+        {:error, reason} ->
+          IO.puts(:stderr, "Failed to start #{interface_type} interface: #{reason}")
+          {:reply, {:error, reason}, state}
+      end
+    else
+      {:reply, {:error, "Unknown interface type: #{interface_type}"}, state}
+    end
+  end
+
+  @impl GenServer
+  def handle_call({:stop_interface, interface_type}, _from, state) do
+    case Map.get(state.interfaces, interface_type) do
+      nil ->
+        {:reply, {:error, "Interface not running: #{interface_type}"}, state}
+
+      interface_info ->
+        case stop_interface_server(interface_type, interface_info) do
+          :ok ->
+            updated_interfaces = Map.delete(state.interfaces, interface_type)
+            updated_state = %{state | interfaces: updated_interfaces}
+
+            IO.puts(:stderr, "Stopped #{interface_type} interface")
+            {:reply, :ok, updated_state}
+
+          {:error, reason} ->
+            IO.puts(:stderr, "Failed to stop #{interface_type} interface: #{reason}")
+            {:reply, {:error, reason}, state}
+        end
+    end
+  end
+
+  @impl GenServer
+  def handle_call({:restart_interface, interface_type}, _from, state) do
+    case Map.get(state.interfaces, interface_type) do
+      nil ->
+        {:reply, {:error, "Interface not running: #{interface_type}"}, state}
+
+      interface_info ->
+        # Stop the interface
+        case stop_interface_server(interface_type, interface_info) do
+          :ok ->
+            # Start it again
+            case start_interface_server(interface_type, state.config, state) do
+              {:ok, new_interface_info} ->
+                updated_interfaces = Map.put(state.interfaces, interface_type, new_interface_info)
+                updated_state = %{state | interfaces: updated_interfaces}
+
+                IO.puts(:stderr, "Restarted #{interface_type} interface")
+                {:reply, {:ok, new_interface_info}, updated_state}
+
+              {:error, reason} ->
+                # Remove from running interfaces since it failed to restart
+                updated_interfaces = Map.delete(state.interfaces, interface_type)
+                updated_state = %{state | interfaces: updated_interfaces}
+
+                IO.puts(:stderr, "Failed to restart #{interface_type} interface: #{reason}")
+                {:reply, {:error, reason}, updated_state}
+            end
+
+          {:error, reason} ->
+            IO.puts(:stderr, "Failed to stop #{interface_type} interface for restart: #{reason}")
+            {:reply, {:error, reason}, state}
+        end
+    end
+  end
+
+  @impl GenServer
+  def handle_call(:get_metrics, _from, state) do
+    # Collect metrics from all running interfaces
+    interface_metrics =
+      Enum.map(state.interfaces, fn {interface_type, interface_info} ->
+        {interface_type, get_interface_metrics(interface_type, interface_info)}
+      end)
+      |> Enum.into(%{})
+
+    metrics = %{
+      interfaces: interface_metrics,
+      sessions: %{
+        total: map_size(state.session_registry),
+        by_interface: get_sessions_by_interface(state.session_registry)
+      },
+      uptime: get_uptime(),
+      timestamp: DateTime.utc_now()
+    }
+
+    {:reply, metrics, state}
+  end
+
+  @impl GenServer
+  def handle_cast({:register_session, session_id, interface_type, session_info}, state) do
+    session_data = %{
+      interface_type: interface_type,
+      info: session_info,
+      registered_at: DateTime.utc_now(),
+      last_activity: DateTime.utc_now()
+    }
+
+    updated_registry = Map.put(state.session_registry, session_id, session_data)
+    updated_state = %{state | session_registry: updated_registry}
+
+    IO.puts(:stderr, "Registered session #{session_id} for #{interface_type}")
+    {:noreply, updated_state}
+  end
+
+  @impl GenServer
+  def handle_cast({:unregister_session, session_id}, state) do
+    case Map.get(state.session_registry, session_id) do
+      nil ->
+        IO.puts(:stderr, "Attempted to unregister unknown session: #{session_id}")
+        {:noreply, state}
+
+      _session_data ->
+        updated_registry = Map.delete(state.session_registry, session_id)
+        updated_state = %{state | session_registry: updated_registry}
+
+        IO.puts(:stderr, "Unregistered session #{session_id}")
+        {:noreply, updated_state}
+    end
+  end
+
+  @impl GenServer
+  def handle_info({:DOWN, _ref, :process, pid, reason}, state) do
+    # Handle interface process crashes
+    case find_interface_by_pid(pid, state.interfaces) do
+      {interface_type, _interface_info} ->
+        IO.puts(:stderr, "#{interface_type} interface crashed: #{inspect(reason)}")
+
+        # Remove from running interfaces
+        updated_interfaces = Map.delete(state.interfaces, interface_type)
+        updated_state = %{state | interfaces: updated_interfaces}
+
+        # Optionally restart if configured
+        if should_auto_restart?(interface_type, state.config) do
+          IO.puts(:stderr, "Auto-restarting #{interface_type} interface")
+          Process.send_after(self(), {:restart_interface, interface_type}, 5000)
+        end
+
+        {:noreply, updated_state}
+
+      nil ->
+        IO.puts(:stderr, "Unknown process died: #{inspect(pid)}")
+        {:noreply, state}
+    end
+  end
+
+  @impl GenServer
+  def handle_info({:restart_interface, interface_type}, state) do
+    case start_interface_server(interface_type, state.config, state) do
+      {:ok, interface_info} ->
+        updated_interfaces = Map.put(state.interfaces, interface_type, interface_info)
+        updated_state = %{state | interfaces: updated_interfaces}
+
+        IO.puts(:stderr, "Auto-restarted #{interface_type} interface")
+        {:noreply, updated_state}
+
+      {:error, reason} ->
+        IO.puts(:stderr, "Failed to auto-restart #{interface_type} interface: #{reason}")
+        {:noreply, state}
+    end
+  end
+
+  @impl GenServer
+  def handle_info(message, state) do
+    IO.puts(:stderr, "Interface Manager received unexpected message: #{inspect(message)}")
+    {:noreply, state}
+  end
+
+  # Private helper functions
+
+  defp load_interface_config(opts) do
+    # Load from application config and override with opts
+    base_config = Application.get_env(:agent_coordinator, :interfaces, %{})
+
+    # Default configuration
+    default_config = %{
+      enabled_interfaces: [:stdio],
+      stdio: %{
+        enabled: true,
+        handle_stdio: true
+      },
+      http: %{
+        enabled: false,
+        port: 8080,
+        host: "localhost",
+        cors_enabled: true
+      },
+      websocket: %{
+        enabled: false,
+        port: 8081,
+        host: "localhost"
+      },
+      auto_restart: %{
+        stdio: false,
+        http: true,
+        websocket: true
+      }
+    }
+
+    # Merge configurations
+    config = deep_merge(default_config, base_config)
+    config = deep_merge(config, Enum.into(opts, %{}))
+
+    # Determine enabled interfaces from environment or config
+    enabled = determine_enabled_interfaces(config)
+
+    # Update individual interface enabled flags based on environment
+    config = update_interface_enabled_flags(config, enabled)
+
+    %{config | enabled_interfaces: enabled}
+  end
+
+  defp determine_enabled_interfaces(config) do
+    # Check environment variables
+    interface_mode = System.get_env("MCP_INTERFACE_MODE", "stdio")
+
+    case interface_mode do
+      "stdio" ->
+        [:stdio]
+
+      "http" ->
+        [:http]
+
+      "websocket" ->
+        [:websocket]
+
+      "all" ->
+        [:stdio, :http, :websocket]
+
+      "remote" ->
+        [:http, :websocket]
+
+      _ ->
+        # Check for comma-separated list
+        if String.contains?(interface_mode, ",") do
+          interface_mode
+          |> String.split(",")
+          |> Enum.map(&String.trim/1)
+          |> Enum.map(&String.to_atom/1)
+          |> Enum.filter(&(&1 in @interface_types))
+        else
+          # Fall back to config
+          Map.get(config, :enabled_interfaces, [:stdio])
+        end
+    end
+  end
+
+  defp update_interface_enabled_flags(config, enabled_interfaces) do
+    # Update individual interface enabled flags based on which interfaces are enabled
+    config
+    |> update_in([:stdio, :enabled], fn _ -> :stdio in enabled_interfaces end)
+    |> update_in([:http, :enabled], fn _ -> :http in enabled_interfaces end)
+    |> update_in([:websocket, :enabled], fn _ -> :websocket in enabled_interfaces end)
+    # Also update ports from environment if set
+    |> update_http_config_from_env()
+  end
+
+  defp update_http_config_from_env(config) do
+    config =
+      case System.get_env("MCP_HTTP_PORT") do
+        nil ->
+          config
+
+        port_str ->
+          case Integer.parse(port_str) do
+            {port, ""} -> put_in(config, [:http, :port], port)
+            _ -> config
+          end
+      end
+
+    case System.get_env("MCP_HTTP_HOST") do
+      nil -> config
+      host -> put_in(config, [:http, :host], host)
+    end
+  end
+
+  # Declare defaults once
+  defp start_interface_server(type, config, state, opts \\ %{})
+
+  defp start_interface_server(:stdio, config, state, _opts) do
+    if config.stdio.enabled and config.stdio.handle_stdio do
+      # Start stdio handler
+      stdio_handler = spawn_link(fn -> handle_stdio_loop(state) end)
+
+      interface_info = %{
+        type: :stdio,
+        pid: stdio_handler,
+        started_at: DateTime.utc_now(),
+        config: config.stdio
+      }
+
+      {:ok, interface_info}
+    else
+      {:error, "STDIO interface not enabled"}
+    end
+  end
+
+  defp start_interface_server(:http, config, _state, opts) do
+    if config.http.enabled do
+      http_opts = [
+        port: Map.get(opts, :port, config.http.port),
+        host: Map.get(opts, :host, config.http.host)
+      ]
+
+      case HttpInterface.start_link(http_opts) do
+        {:ok, pid} ->
+          # Monitor the process
+          ref = Process.monitor(pid)
+
+          interface_info = %{
+            type: :http,
+            pid: pid,
+            monitor_ref: ref,
+            started_at: DateTime.utc_now(),
+            config: Map.merge(config.http, Enum.into(opts, %{})),
+            port: http_opts[:port]
+          }
+
+          {:ok, interface_info}
+
+        {:error, reason} ->
+          {:error, reason}
+      end
+    else
+      {:error, "HTTP interface not enabled"}
+    end
+  end
+
+  defp start_interface_server(:websocket, config, _state, _opts) do
+    if config.websocket.enabled do
+      # WebSocket is handled by the HTTP server, so just mark it as enabled
+      interface_info = %{
+        type: :websocket,
+        # Embedded in HTTP server
+        pid: :embedded,
+        started_at: DateTime.utc_now(),
+        config: config.websocket
+      }
+
+      {:ok, interface_info}
+    else
+      {:error, "WebSocket interface not enabled"}
+    end
+  end
+
+  defp start_interface_server(unknown_type, _config, _state, _opts) do
+    {:error, "Unknown interface type: #{unknown_type}"}
+  end
+
+  defp stop_interface_server(:stdio, interface_info) do
+    if Process.alive?(interface_info.pid) do
+      Process.exit(interface_info.pid, :shutdown)
+      :ok
+    else
+      :ok
+    end
+  end
+
+  defp stop_interface_server(:http, interface_info) do
+    if Process.alive?(interface_info.pid) do
+      Process.exit(interface_info.pid, :shutdown)
+      :ok
+    else
+      :ok
+    end
+  end
+
+  defp stop_interface_server(:websocket, _interface_info) do
+    # WebSocket is embedded in HTTP server, so nothing to stop separately
+    :ok
+  end
+
+  defp stop_interface_server(_type, _interface_info) do
+    {:error, "Unknown interface type"}
+  end
+
+  defp handle_stdio_loop(state) do
+    # Handle MCP JSON-RPC messages from STDIO
+    # Use different approaches for Docker vs regular environments
+    if docker_environment?() do
+      handle_stdio_docker_loop(state)
+    else
+      handle_stdio_regular_loop(state)
+    end
+  end
+
+  defp handle_stdio_regular_loop(state) do
+    case IO.read(:stdio, :line) do
+      :eof ->
+        IO.puts(:stderr, "STDIO interface shutting down (EOF)")
+        exit(:normal)
+
+      {:error, reason} ->
+        IO.puts(:stderr, "STDIO error: #{inspect(reason)}")
+        exit({:error, reason})
+
+      line ->
+        handle_stdio_message(String.trim(line), state)
+        handle_stdio_regular_loop(state)
+    end
+  end
+
+  defp handle_stdio_docker_loop(state) do
+    # In Docker, use regular IO.read instead of Port.open({:fd, 0, 1})
+    # to avoid "driver_select stealing control of fd=0" conflicts with external MCP servers
+    # This allows external servers to use pipes while Agent Coordinator reads from stdin
+    case IO.read(:stdio, :line) do
+      :eof ->
+        IO.puts(:stderr, "STDIO interface shutting down (EOF)")
+        exit(:normal)
+
+      {:error, reason} ->
+        IO.puts(:stderr, "STDIO error: #{inspect(reason)}")
+        exit({:error, reason})
+
+      line ->
+        handle_stdio_message(String.trim(line), state)
+        handle_stdio_docker_loop(state)
+    end
+  end
+
+  defp handle_stdio_message("", _state), do: :ok
+
+  defp handle_stdio_message(json_line, _state) do
+    try do
+      request = Jason.decode!(json_line)
+
+      # Create local client context for stdio
+      _client_context = ToolFilter.local_context()
+
+      # Process through MCP server with full tool access
+      response = AgentCoordinator.MCPServer.handle_mcp_request(request)
+
+      # Send response
+      IO.puts(Jason.encode!(response))
+    rescue
+      e in Jason.DecodeError ->
+        error_response = %{
+          "jsonrpc" => "2.0",
+          "id" => nil,
+          "error" => %{
+            "code" => -32700,
+            "message" => "Parse error: #{Exception.message(e)}"
+          }
+        }
+
+        IO.puts(Jason.encode!(error_response))
+
+      e ->
+        # Try to get the ID from the malformed request
+        id =
+          try do
+            partial = Jason.decode!(json_line)
+            Map.get(partial, "id")
+          rescue
+            _ -> nil
+          end
+
+        error_response = %{
+          "jsonrpc" => "2.0",
+          "id" => id,
+          "error" => %{
+            "code" => -32603,
+            "message" => "Internal error: #{Exception.message(e)}"
+          }
+        }
+
+        IO.puts(Jason.encode!(error_response))
+    end
+  end
+
+  defp get_interface_metrics(:stdio, interface_info) do
+    %{
+      type: :stdio,
+      status: if(Process.alive?(interface_info.pid), do: :running, else: :stopped),
+      uptime: DateTime.diff(DateTime.utc_now(), interface_info.started_at, :second),
+      pid: interface_info.pid
+    }
+  end
+
+  defp get_interface_metrics(:http, interface_info) do
+    %{
+      type: :http,
+      status: if(Process.alive?(interface_info.pid), do: :running, else: :stopped),
+      uptime: DateTime.diff(DateTime.utc_now(), interface_info.started_at, :second),
+      port: interface_info.port,
+      pid: interface_info.pid
+    }
+  end
+
+  defp get_interface_metrics(:websocket, interface_info) do
+    %{
+      type: :websocket,
+      # Embedded in HTTP server
+      status: :running,
+      uptime: DateTime.diff(DateTime.utc_now(), interface_info.started_at, :second),
+      embedded: true
+    }
+  end
+
+  defp get_sessions_by_interface(session_registry) do
+    Enum.reduce(session_registry, %{}, fn {_session_id, session_data}, acc ->
+      interface_type = session_data.interface_type
+      count = Map.get(acc, interface_type, 0)
+      Map.put(acc, interface_type, count + 1)
+    end)
+  end
+
+  defp find_interface_by_pid(pid, interfaces) do
+    Enum.find(interfaces, fn {_type, interface_info} ->
+      interface_info.pid == pid
+    end)
+  end
+
+  defp should_auto_restart?(interface_type, config) do
+    Map.get(config.auto_restart, interface_type, false)
+  end
+
+  defp initialize_metrics do
+    %{
+      started_at: DateTime.utc_now(),
+      requests_total: 0,
+      errors_total: 0,
+      sessions_total: 0
+    }
+  end
+
+  defp get_uptime do
+    {uptime_ms, _} = :erlang.statistics(:wall_clock)
+    div(uptime_ms, 1000)
+  end
+
+  # Deep merge helper for configuration
+  defp deep_merge(left, right) when is_map(left) and is_map(right) do
+    Map.merge(left, right, fn _key, left_val, right_val ->
+      deep_merge(left_val, right_val)
+    end)
+  end
+
+  defp deep_merge(_left, right), do: right
+
+  # Check if running in Docker environment
+  defp docker_environment? do
+    # Check common Docker environment indicators
+    # Check if we're running under a container init system
+    System.get_env("DOCKER_CONTAINER") != nil or
+      System.get_env("container") != nil or
+      System.get_env("DOCKERIZED") != nil or
+      File.exists?("/.dockerenv") or
+      (File.exists?("/proc/1/cgroup") and
+         File.read!("/proc/1/cgroup") |> String.contains?("docker")) or
+      String.contains?(to_string(System.get_env("PATH", "")), "/app/") or
+      case File.read("/proc/1/comm") do
+        {:ok, comm} -> String.trim(comm) in ["bash", "sh", "docker-init", "tini"]
+        _ -> false
+      end
+  end
+end

lib/agent_coordinator/session_manager.ex

@@ -0,0 +1,197 @@
+defmodule AgentCoordinator.SessionManager do
+  @moduledoc """
+  Session management for MCP agents with token-based authentication.
+
+  Implements MCP-compliant session management where:
+  1. Agents register and receive session tokens
+  2. Session tokens must be included in Mcp-Session-Id headers
+  3. Session tokens are cryptographically secure and time-limited
+  4. Sessions are tied to specific agent IDs
+  """
+
+  use GenServer
+  require Logger
+
+  defstruct [
+    :sessions,
+    :config
+  ]
+
+  @session_expiry_minutes 60
+  @cleanup_interval_minutes 5
+
+  # Client API
+
+  def start_link(opts \\ []) do
+    GenServer.start_link(__MODULE__, opts, name: __MODULE__)
+  end
+
+  @doc """
+  Generate a new session token for an agent.
+  Returns {:ok, session_token} or {:error, reason}
+  """
+  def create_session(agent_id, metadata \\ %{}) do
+    GenServer.call(__MODULE__, {:create_session, agent_id, metadata})
+  end
+
+  @doc """
+  Validate a session token and return agent information.
+  Returns {:ok, agent_id, metadata} or {:error, reason}
+  """
+  def validate_session(session_token) do
+    GenServer.call(__MODULE__, {:validate_session, session_token})
+  end
+
+  @doc """
+  Invalidate a session token.
+  """
+  def invalidate_session(session_token) do
+    GenServer.call(__MODULE__, {:invalidate_session, session_token})
+  end
+
+  @doc """
+  Get all active sessions for an agent.
+  """
+  def get_agent_sessions(agent_id) do
+    GenServer.call(__MODULE__, {:get_agent_sessions, agent_id})
+  end
+
+  @doc """
+  Clean up expired sessions.
+  """
+  def cleanup_expired_sessions do
+    GenServer.cast(__MODULE__, :cleanup_expired)
+  end
+
+  # Server implementation
+
+  @impl GenServer
+  def init(opts) do
+    # Start periodic cleanup
+    schedule_cleanup()
+
+    state = %__MODULE__{
+      sessions: %{},
+      config: %{
+        expiry_minutes: Keyword.get(opts, :expiry_minutes, @session_expiry_minutes),
+        cleanup_interval: Keyword.get(opts, :cleanup_interval, @cleanup_interval_minutes)
+      }
+    }
+
+    IO.puts(:stderr, "SessionManager started with #{state.config.expiry_minutes}min expiry")
+    {:ok, state}
+  end
+
+  @impl GenServer
+  def handle_call({:create_session, agent_id, metadata}, _from, state) do
+    session_token = generate_session_token()
+    expires_at = DateTime.add(DateTime.utc_now(), state.config.expiry_minutes, :minute)
+
+    session_data = %{
+      agent_id: agent_id,
+      token: session_token,
+      created_at: DateTime.utc_now(),
+      expires_at: expires_at,
+      metadata: metadata,
+      last_activity: DateTime.utc_now()
+    }
+
+    new_sessions = Map.put(state.sessions, session_token, session_data)
+    new_state = %{state | sessions: new_sessions}
+
+    IO.puts(:stderr, "Created session #{session_token} for agent #{agent_id}")
+    {:reply, {:ok, session_token}, new_state}
+  end
+
+  @impl GenServer
+  def handle_call({:validate_session, session_token}, _from, state) do
+    case Map.get(state.sessions, session_token) do
+      nil ->
+        {:reply, {:error, :session_not_found}, state}
+
+      session_data ->
+        if DateTime.compare(DateTime.utc_now(), session_data.expires_at) == :gt do
+          # Session expired, remove it
+          new_sessions = Map.delete(state.sessions, session_token)
+          new_state = %{state | sessions: new_sessions}
+          {:reply, {:error, :session_expired}, new_state}
+        else
+          # Session valid, update last activity
+          updated_session = %{session_data | last_activity: DateTime.utc_now()}
+          new_sessions = Map.put(state.sessions, session_token, updated_session)
+          new_state = %{state | sessions: new_sessions}
+
+          result = {:ok, session_data.agent_id, session_data.metadata}
+          {:reply, result, new_state}
+        end
+    end
+  end
+
+  @impl GenServer
+  def handle_call({:invalidate_session, session_token}, _from, state) do
+    case Map.get(state.sessions, session_token) do
+      nil ->
+        {:reply, {:error, :session_not_found}, state}
+
+      session_data ->
+        new_sessions = Map.delete(state.sessions, session_token)
+        new_state = %{state | sessions: new_sessions}
+
+        IO.puts(
+          :stderr,
+          "Invalidated session #{session_token} for agent #{session_data.agent_id}"
+        )
+
+        {:reply, :ok, new_state}
+    end
+  end
+
+  @impl GenServer
+  def handle_call({:get_agent_sessions, agent_id}, _from, state) do
+    agent_sessions =
+      state.sessions
+      |> Enum.filter(fn {_token, session} -> session.agent_id == agent_id end)
+      |> Enum.map(fn {token, session} -> {token, session} end)
+
+    {:reply, agent_sessions, state}
+  end
+
+  @impl GenServer
+  def handle_cast(:cleanup_expired, state) do
+    now = DateTime.utc_now()
+
+    {expired_sessions, active_sessions} =
+      Enum.split_with(state.sessions, fn {_token, session} ->
+        DateTime.compare(now, session.expires_at) == :gt
+      end)
+
+    if length(expired_sessions) > 0 do
+      IO.puts(:stderr, "Cleaned up #{length(expired_sessions)} expired sessions")
+    end
+
+    new_state = %{state | sessions: Map.new(active_sessions)}
+    schedule_cleanup()
+    {:noreply, new_state}
+  end
+
+  @impl GenServer
+  def handle_info(:cleanup_expired, state) do
+    handle_cast(:cleanup_expired, state)
+  end
+
+  # Private functions
+
+  defp generate_session_token do
+    # Generate cryptographically secure session token
+    # Format: "mcp_" + base64url(32 random bytes) + "_" + timestamp
+    random_bytes = :crypto.strong_rand_bytes(32)
+    timestamp = DateTime.utc_now() |> DateTime.to_unix()
+
+    token_body = Base.url_encode64(random_bytes, padding: false)
+    "mcp_#{token_body}_#{timestamp}"
+  end
+
+  defp schedule_cleanup do
+    Process.send_after(self(), :cleanup_expired, @cleanup_interval_minutes * 60 * 1000)
+  end
+end

lib/agent_coordinator/task.ex

@@ -17,7 +17,12 @@ defmodule AgentCoordinator.Task do
              :cross_codebase_dependencies,
              :created_at,
              :updated_at,
-             :metadata
+             :metadata,
+             :feedback,
+             :director_notes,
+             :assignment_reason,
+             :refinement_history,
+             :blocking_issues
            ]}
   defstruct [
     :id,
@@ -32,7 +37,12 @@ defmodule AgentCoordinator.Task do
     :cross_codebase_dependencies,
     :created_at,
     :updated_at,
-    :metadata
+    :metadata,
+    :feedback,
+    :director_notes,
+    :assignment_reason,
+    :refinement_history,
+    :blocking_issues
   ]
 
   @type status :: :pending | :in_progress | :completed | :failed | :blocked
@@ -51,7 +61,12 @@ defmodule AgentCoordinator.Task do
           cross_codebase_dependencies: [%{codebase_id: String.t(), task_id: String.t()}],
           created_at: DateTime.t(),
           updated_at: DateTime.t(),
-          metadata: map()
+          metadata: map(),
+          feedback: String.t() | nil,
+          director_notes: String.t() | nil,
+          assignment_reason: String.t() | nil,
+          refinement_history: [map()],
+          blocking_issues: [String.t()]
         }
 
   def new(title, description, opts \\ []) do
@@ -78,7 +93,12 @@ defmodule AgentCoordinator.Task do
       cross_codebase_dependencies: get_opt.(:cross_codebase_dependencies, []),
       created_at: now,
       updated_at: now,
-      metadata: get_opt.(:metadata, %{})
+      metadata: get_opt.(:metadata, %{}),
+      feedback: nil,
+      director_notes: nil,
+      assignment_reason: nil,
+      refinement_history: [],
+      blocking_issues: []
     }
   end
 
@@ -115,4 +135,109 @@ defmodule AgentCoordinator.Task do
     dependencies = [dependency | task.cross_codebase_dependencies]
     %{task | cross_codebase_dependencies: dependencies, updated_at: DateTime.utc_now()}
   end
+
+  # Director management functions
+
+  def add_feedback(task, feedback, director_id) do
+    refinement_entry = %{
+      type: "feedback_added",
+      director_id: director_id,
+      content: feedback,
+      timestamp: DateTime.utc_now()
+    }
+
+    %{
+      task
+      | feedback: feedback,
+        refinement_history: [refinement_entry | task.refinement_history],
+        updated_at: DateTime.utc_now()
+    }
+  end
+
+  def add_director_notes(task, notes, director_id) do
+    refinement_entry = %{
+      type: "director_notes_added",
+      director_id: director_id,
+      content: notes,
+      timestamp: DateTime.utc_now()
+    }
+
+    %{
+      task
+      | director_notes: notes,
+        refinement_history: [refinement_entry | task.refinement_history],
+        updated_at: DateTime.utc_now()
+    }
+  end
+
+  def set_assignment_reason(task, reason, director_id) do
+    refinement_entry = %{
+      type: "assignment_reason_set",
+      director_id: director_id,
+      reason: reason,
+      timestamp: DateTime.utc_now()
+    }
+
+    %{
+      task
+      | assignment_reason: reason,
+        refinement_history: [refinement_entry | task.refinement_history],
+        updated_at: DateTime.utc_now()
+    }
+  end
+
+  def add_blocking_issue(task, issue, director_id) do
+    new_issues = [issue | task.blocking_issues] |> Enum.uniq()
+
+    refinement_entry = %{
+      type: "blocking_issue_added",
+      director_id: director_id,
+      issue: issue,
+      timestamp: DateTime.utc_now()
+    }
+
+    %{
+      task
+      | blocking_issues: new_issues,
+        refinement_history: [refinement_entry | task.refinement_history],
+        updated_at: DateTime.utc_now()
+    }
+  end
+
+  def remove_blocking_issue(task, issue, director_id) do
+    new_issues = task.blocking_issues |> Enum.reject(&(&1 == issue))
+
+    refinement_entry = %{
+      type: "blocking_issue_removed",
+      director_id: director_id,
+      issue: issue,
+      timestamp: DateTime.utc_now()
+    }
+
+    %{
+      task
+      | blocking_issues: new_issues,
+        refinement_history: [refinement_entry | task.refinement_history],
+        updated_at: DateTime.utc_now()
+    }
+  end
+
+  def reassign(task, new_agent_id, director_id, reason) do
+    refinement_entry = %{
+      type: "task_reassigned",
+      director_id: director_id,
+      from_agent_id: task.agent_id,
+      to_agent_id: new_agent_id,
+      reason: reason,
+      timestamp: DateTime.utc_now()
+    }
+
+    %{
+      task
+      | agent_id: new_agent_id,
+        assignment_reason: reason,
+        refinement_history: [refinement_entry | task.refinement_history],
+        updated_at: DateTime.utc_now()
+    }
+  end
 end

lib/agent_coordinator/task_registry.ex

@@ -79,6 +79,10 @@ defmodule AgentCoordinator.TaskRegistry do
     GenServer.call(__MODULE__, {:complete_task, agent_id}, 30_000)
   end
 
+  def update_agent(agent_id, updated_agent) do
+    GenServer.call(__MODULE__, {:update_agent, agent_id, updated_agent})
+  end
+
   def get_task_board do
     GenServer.call(__MODULE__, :get_task_board)
   end
@@ -423,6 +427,18 @@ defmodule AgentCoordinator.TaskRegistry do
     end
   end
 
+  def handle_call({:update_agent, agent_id, updated_agent}, _from, state) do
+    case Map.get(state.agents, agent_id) do
+      nil ->
+        {:reply, {:error, :agent_not_found}, state}
+
+      _current_agent ->
+        new_agents = Map.put(state.agents, agent_id, updated_agent)
+        new_state = %{state | agents: new_agents}
+        {:reply, :ok, new_state}
+    end
+  end
+
   def handle_call(:get_task_board, _from, state) do
     agents_info =
       Enum.map(state.agents, fn {_id, agent} ->
@@ -439,7 +455,9 @@ defmodule AgentCoordinator.TaskRegistry do
           capabilities: agent.capabilities,
           current_task: current_task,
           last_heartbeat: agent.last_heartbeat,
-          online: Agent.is_online?(agent)
+          online: Agent.is_online?(agent),
+          current_activity: agent.current_activity,
+          current_files: agent.current_files || []
         }
       end)
 

lib/agent_coordinator/tool_filter.ex

@@ -0,0 +1,318 @@
+defmodule AgentCoordinator.ToolFilter do
+  @moduledoc """
+  Intelligent tool filtering system that adapts available tools based on client context.
+
+  This module determines which tools should be available to different types of clients:
+  - Local clients: Full tool access including filesystem and VSCode tools
+  - Remote clients: Limited to agent coordination and safe remote tools
+  - Web clients: Browser-safe tools only
+
+  Tool filtering is based on:
+  - Tool capabilities and requirements
+  - Client connection type (local/remote)
+  - Security considerations
+  - Tool metadata annotations
+  """
+
+  require Logger
+
+  @doc """
+  Context information about the client connection.
+  """
+  defstruct [
+    # :local, :remote, :web
+    :connection_type,
+    # Client identification
+    :client_info,
+    # Client declared capabilities
+    :capabilities,
+    # :trusted, :sandboxed, :restricted
+    :security_level,
+    # For web clients, the origin domain
+    :origin,
+    # Client user agent string
+    :user_agent
+  ]
+
+  @type client_context :: %__MODULE__{
+          connection_type: :local | :remote | :web,
+          client_info: map(),
+          capabilities: [String.t()],
+          security_level: :trusted | :sandboxed | :restricted,
+          origin: String.t() | nil,
+          user_agent: String.t() | nil
+        }
+
+  # Tool name patterns that indicate local-only functionality (defined as function to avoid compilation issues)
+  defp local_only_patterns do
+    [
+      ~r/^(read_file|write_file|create_file|delete_file)/,
+      ~r/^(list_dir|search_files|move_file)/,
+      ~r/^vscode_/,
+      ~r/^(run_in_terminal|get_terminal)/,
+      ~r/filesystem/,
+      ~r/directory/
+    ]
+  end
+
+  # Tools that are always safe for remote access
+  @always_safe_tools [
+    # Agent coordination tools
+    "register_agent",
+    "create_task",
+    "get_next_task",
+    "complete_task",
+    "get_task_board",
+    "get_detailed_task_board",
+    "get_agent_task_history",
+    "heartbeat",
+    "unregister_agent",
+    "register_task_set",
+    "create_agent_task",
+    "create_cross_codebase_task",
+    "list_codebases",
+    "register_codebase",
+    "get_codebase_status",
+    "add_codebase_dependency",
+
+    # Memory and knowledge graph (safe for remote)
+    "create_entities",
+    "create_relations",
+    "read_graph",
+    "search_nodes",
+    "open_nodes",
+    "add_observations",
+    "delete_entities",
+    "delete_relations",
+    "delete_observations",
+
+    # Sequential thinking (safe for remote)
+    "sequentialthinking",
+
+    # Library documentation (safe for remote)
+    "get-library-docs",
+    "resolve-library-id"
+  ]
+
+  @doc """
+  Filter tools based on client context.
+
+  Returns a filtered list of tools appropriate for the client's context.
+  """
+  @spec filter_tools([map()], client_context()) :: [map()]
+  def filter_tools(tools, %__MODULE__{} = context) do
+    tools
+    |> Enum.filter(&should_include_tool?(&1, context))
+    |> maybe_annotate_tools(context)
+  end
+
+  @doc """
+  Determine if a tool should be included for the given client context.
+  """
+  @spec should_include_tool?(map(), client_context()) :: boolean()
+  def should_include_tool?(tool, context) do
+    tool_name = Map.get(tool, "name", "")
+
+    cond do
+      # Always include safe tools
+      tool_name in @always_safe_tools ->
+        true
+
+      # Local clients get everything
+      context.connection_type == :local ->
+        true
+
+      # Remote/web clients get filtered access
+      context.connection_type in [:remote, :web] ->
+        not is_local_only_tool?(tool, context)
+
+      # Default to restrictive
+      true ->
+        tool_name in @always_safe_tools
+    end
+  end
+
+  @doc """
+  Detect client context from connection information.
+  """
+  @spec detect_client_context(map()) :: client_context()
+  def detect_client_context(connection_info) do
+    connection_type = determine_connection_type(connection_info)
+    security_level = determine_security_level(connection_type, connection_info)
+
+    %__MODULE__{
+      connection_type: connection_type,
+      client_info: Map.get(connection_info, :client_info, %{}),
+      capabilities: Map.get(connection_info, :capabilities, []),
+      security_level: security_level,
+      origin: Map.get(connection_info, :origin),
+      user_agent: Map.get(connection_info, :user_agent)
+    }
+  end
+
+  @doc """
+  Create a local client context (for stdio and direct connections).
+  """
+  @spec local_context() :: client_context()
+  def local_context do
+    %__MODULE__{
+      connection_type: :local,
+      client_info: %{type: "local_stdio"},
+      capabilities: ["full_access"],
+      security_level: :trusted,
+      origin: nil,
+      user_agent: "agent-coordinator-local"
+    }
+  end
+
+  @doc """
+  Create a remote client context.
+  """
+  @spec remote_context(map()) :: client_context()
+  def remote_context(opts \\ %{}) do
+    %__MODULE__{
+      connection_type: :remote,
+      client_info: Map.get(opts, :client_info, %{type: "remote_http"}),
+      capabilities: Map.get(opts, :capabilities, ["coordination"]),
+      security_level: :sandboxed,
+      origin: Map.get(opts, :origin),
+      user_agent: Map.get(opts, :user_agent, "unknown")
+    }
+  end
+
+  @doc """
+  Get tool filtering statistics for monitoring.
+  """
+  @spec get_filter_stats([map()], client_context()) :: map()
+  def get_filter_stats(original_tools, context) do
+    filtered_tools = filter_tools(original_tools, context)
+
+    %{
+      original_count: length(original_tools),
+      filtered_count: length(filtered_tools),
+      removed_count: length(original_tools) - length(filtered_tools),
+      connection_type: context.connection_type,
+      security_level: context.security_level,
+      filtered_at: DateTime.utc_now()
+    }
+  end
+
+  # Private helpers
+
+  defp is_local_only_tool?(tool, _context) do
+    tool_name = Map.get(tool, "name", "")
+    description = Map.get(tool, "description", "")
+
+    # Check against known local-only tool names
+    name_is_local =
+      tool_name in get_local_only_tool_names() or
+        Enum.any?(local_only_patterns(), &Regex.match?(&1, tool_name))
+
+    # Check description for local-only indicators
+    description_is_local =
+      String.contains?(
+        String.downcase(description),
+        ["filesystem", "file system", "vscode", "terminal", "local file", "directory"]
+      )
+
+    # Check tool schema for local-only parameters
+    schema_is_local = has_local_only_parameters?(tool)
+
+    name_is_local or description_is_local or schema_is_local
+  end
+
+  defp get_local_only_tool_names do
+    [
+      # Filesystem tools
+      "read_file",
+      "write_file",
+      "create_file",
+      "delete_file",
+      "list_directory",
+      "search_files",
+      "move_file",
+      "get_file_info",
+      "list_allowed_directories",
+      "directory_tree",
+      "edit_file",
+      "read_text_file",
+      "read_multiple_files",
+      "read_media_file",
+
+      # VSCode tools
+      "vscode_create_file",
+      "vscode_write_file",
+      "vscode_read_file",
+      "vscode_delete_file",
+      "vscode_list_directory",
+      "vscode_get_active_editor",
+      "vscode_set_editor_content",
+      "vscode_get_selection",
+      "vscode_set_selection",
+      "vscode_show_message",
+      "vscode_run_command",
+      "vscode_get_workspace_folders",
+
+      # Terminal/process tools
+      "run_in_terminal",
+      "get_terminal_output",
+      "terminal_last_command",
+      "terminal_selection"
+    ]
+  end
+
+  defp has_local_only_parameters?(tool) do
+    schema = Map.get(tool, "inputSchema", %{})
+    properties = Map.get(schema, "properties", %{})
+
+    # Look for file path parameters or other local indicators
+    Enum.any?(properties, fn {param_name, param_schema} ->
+      param_name in ["path", "filePath", "file_path", "directory", "workspace_path"] or
+        String.contains?(
+          Map.get(param_schema, "description", ""),
+          ["file path", "directory", "workspace", "local"]
+        )
+    end)
+  end
+
+  defp determine_connection_type(connection_info) do
+    cond do
+      Map.get(connection_info, :transport) == :stdio -> :local
+      Map.get(connection_info, :transport) == :websocket -> :web
+      Map.get(connection_info, :transport) == :http -> :remote
+      Map.get(connection_info, :remote_ip) == "127.0.0.1" -> :local
+      Map.get(connection_info, :remote_ip) == "::1" -> :local
+      Map.has_key?(connection_info, :remote_ip) -> :remote
+      # Default to local for stdio
+      true -> :local
+    end
+  end
+
+  defp determine_security_level(connection_type, connection_info) do
+    case connection_type do
+      :local ->
+        :trusted
+
+      :remote ->
+        if Map.get(connection_info, :secure, false) do
+          :sandboxed
+        else
+          :restricted
+        end
+
+      :web ->
+        :sandboxed
+    end
+  end
+
+  defp maybe_annotate_tools(tools, context) do
+    # Add context information to tools if needed
+    if context.connection_type == :remote do
+      Enum.map(tools, fn tool ->
+        Map.put(tool, "_filtered_for", "remote_client")
+      end)
+    else
+      tools
+    end
+  end
+end

lib/agent_coordinator/websocket_handler.ex

@@ -0,0 +1,388 @@
+defmodule AgentCoordinator.WebSocketHandler do
+  @moduledoc """
+  WebSocket handler for real-time MCP communication.
+
+  Provides:
+  - Real-time MCP JSON-RPC over WebSocket
+  - Tool filtering based on client context
+  - Session management
+  - Heartbeat and connection monitoring
+  """
+
+  @behaviour WebSock
+  require Logger
+  alias AgentCoordinator.{MCPServer, ToolFilter}
+
+  defstruct [
+    :client_context,
+    :session_id,
+    :last_heartbeat,
+    :agent_id,
+    :connection_info
+  ]
+
+  # 30 seconds
+  @heartbeat_interval 30_000
+
+  @impl WebSock
+  def init(opts) do
+    session_id = "ws_" <> UUID.uuid4()
+
+    # Initialize connection state
+    state = %__MODULE__{
+      session_id: session_id,
+      last_heartbeat: DateTime.utc_now(),
+      connection_info: opts
+    }
+
+    # Start heartbeat timer
+    Process.send_after(self(), :heartbeat, @heartbeat_interval)
+
+    IO.puts(:stderr, "WebSocket connection established: #{session_id}")
+
+    {:ok, state}
+  end
+
+  @impl WebSock
+  def handle_in({text, [opcode: :text]}, state) do
+    case Jason.decode(text) do
+      {:ok, message} ->
+        handle_mcp_message(message, state)
+
+      {:error, %Jason.DecodeError{} = error} ->
+        error_response = %{
+          "jsonrpc" => "2.0",
+          "id" => nil,
+          "error" => %{
+            "code" => -32700,
+            "message" => "Parse error: #{Exception.message(error)}"
+          }
+        }
+
+        {:reply, {:text, Jason.encode!(error_response)}, state}
+    end
+  end
+
+  @impl WebSock
+  def handle_in({_binary, [opcode: :binary]}, state) do
+    IO.puts(:stderr, "Received unexpected binary data on WebSocket")
+    {:ok, state}
+  end
+
+  @impl WebSock
+  def handle_info(:heartbeat, state) do
+    # Send heartbeat if we have an agent registered
+    if state.agent_id do
+      heartbeat_request = %{
+        "jsonrpc" => "2.0",
+        "id" => generate_request_id(),
+        "method" => "tools/call",
+        "params" => %{
+          "name" => "heartbeat",
+          "arguments" => %{"agent_id" => state.agent_id}
+        }
+      }
+
+      # Send heartbeat to MCP server
+      MCPServer.handle_mcp_request(heartbeat_request)
+    end
+
+    # Schedule next heartbeat
+    Process.send_after(self(), :heartbeat, @heartbeat_interval)
+
+    updated_state = %{state | last_heartbeat: DateTime.utc_now()}
+    {:ok, updated_state}
+  end
+
+  @impl WebSock
+  def handle_info(message, state) do
+    IO.puts(:stderr, "Received unexpected message: #{inspect(message)}")
+    {:ok, state}
+  end
+
+  @impl WebSock
+  def terminate(:remote, state) do
+    IO.puts(:stderr, "WebSocket connection closed by client: #{state.session_id}")
+    cleanup_session(state)
+    :ok
+  end
+
+  @impl WebSock
+  def terminate(reason, state) do
+    IO.puts(
+      :stderr,
+      "WebSocket connection terminated: #{state.session_id}, reason: #{inspect(reason)}"
+    )
+
+    cleanup_session(state)
+    :ok
+  end
+
+  # Private helper functions
+
+  defp handle_mcp_message(message, state) do
+    method = Map.get(message, "method")
+
+    case method do
+      "initialize" ->
+        handle_initialize(message, state)
+
+      "tools/list" ->
+        handle_tools_list(message, state)
+
+      "tools/call" ->
+        handle_tool_call(message, state)
+
+      "notifications/initialized" ->
+        handle_initialized_notification(message, state)
+
+      _ ->
+        # Forward other methods to MCP server
+        forward_to_mcp_server(message, state)
+    end
+  end
+
+  defp handle_initialize(message, state) do
+    # Extract client info from initialize message
+    params = Map.get(message, "params", %{})
+    client_info = Map.get(params, "clientInfo", %{})
+
+    # Detect client context
+    connection_info = %{
+      transport: :websocket,
+      client_info: client_info,
+      session_id: state.session_id,
+      capabilities: Map.get(params, "capabilities", [])
+    }
+
+    client_context = ToolFilter.detect_client_context(connection_info)
+
+    # Send initialize response
+    response = %{
+      "jsonrpc" => "2.0",
+      "id" => Map.get(message, "id"),
+      "result" => %{
+        "protocolVersion" => "2024-11-05",
+        "capabilities" => %{
+          "tools" => %{},
+          "coordination" => %{
+            "automatic_task_tracking" => true,
+            "agent_management" => true,
+            "multi_server_proxy" => true,
+            "heartbeat_coverage" => true,
+            "session_tracking" => true,
+            "tool_filtering" => true,
+            "websocket_realtime" => true
+          }
+        },
+        "serverInfo" => %{
+          "name" => "agent-coordinator-websocket",
+          "version" => AgentCoordinator.version(),
+          "description" => "Agent Coordinator WebSocket interface with tool filtering"
+        },
+        "_meta" => %{
+          "session_id" => state.session_id,
+          "connection_type" => client_context.connection_type,
+          "security_level" => client_context.security_level
+        }
+      }
+    }
+
+    updated_state = %{state | client_context: client_context, connection_info: connection_info}
+
+    {:reply, {:text, Jason.encode!(response)}, updated_state}
+  end
+
+  defp handle_tools_list(message, state) do
+    if state.client_context do
+      # Get filtered tools based on client context
+      all_tools = MCPServer.get_tools()
+      filtered_tools = ToolFilter.filter_tools(all_tools, state.client_context)
+
+      response = %{
+        "jsonrpc" => "2.0",
+        "id" => Map.get(message, "id"),
+        "result" => %{
+          "tools" => filtered_tools,
+          "_meta" => %{
+            "filtered_for" => state.client_context.connection_type,
+            "original_count" => length(all_tools),
+            "filtered_count" => length(filtered_tools),
+            "session_id" => state.session_id
+          }
+        }
+      }
+
+      {:reply, {:text, Jason.encode!(response)}, state}
+    else
+      # Client hasn't initialized yet
+      error_response = %{
+        "jsonrpc" => "2.0",
+        "id" => Map.get(message, "id"),
+        "error" => %{
+          "code" => -32002,
+          "message" => "Client must initialize first"
+        }
+      }
+
+      {:reply, {:text, Jason.encode!(error_response)}, state}
+    end
+  end
+
+  defp handle_tool_call(message, state) do
+    if state.client_context do
+      tool_name = get_in(message, ["params", "name"])
+
+      # Check if tool is allowed for this client context
+      if tool_allowed_for_context?(tool_name, state.client_context) do
+        # Enhance message with session info
+        enhanced_message = add_websocket_session_info(message, state)
+
+        # Track agent ID if this is a register_agent call
+        updated_state = maybe_track_agent_id(message, state)
+
+        # Forward to MCP server
+        case MCPServer.handle_mcp_request(enhanced_message) do
+          response when is_map(response) ->
+            {:reply, {:text, Jason.encode!(response)}, updated_state}
+
+          unexpected ->
+            IO.puts(:stderr, "Unexpected MCP response: #{inspect(unexpected)}")
+
+            error_response = %{
+              "jsonrpc" => "2.0",
+              "id" => Map.get(message, "id"),
+              "error" => %{
+                "code" => -32603,
+                "message" => "Internal server error"
+              }
+            }
+
+            {:reply, {:text, Jason.encode!(error_response)}, updated_state}
+        end
+      else
+        # Tool not allowed for this client
+        error_response = %{
+          "jsonrpc" => "2.0",
+          "id" => Map.get(message, "id"),
+          "error" => %{
+            "code" => -32601,
+            "message" =>
+              "Tool not available for #{state.client_context.connection_type} clients: #{tool_name}"
+          }
+        }
+
+        {:reply, {:text, Jason.encode!(error_response)}, state}
+      end
+    else
+      # Client hasn't initialized yet
+      error_response = %{
+        "jsonrpc" => "2.0",
+        "id" => Map.get(message, "id"),
+        "error" => %{
+          "code" => -32002,
+          "message" => "Client must initialize first"
+        }
+      }
+
+      {:reply, {:text, Jason.encode!(error_response)}, state}
+    end
+  end
+
+  defp handle_initialized_notification(_message, state) do
+    # Client is ready to receive notifications
+    IO.puts(:stderr, "WebSocket client initialized: #{state.session_id}")
+    {:ok, state}
+  end
+
+  defp forward_to_mcp_server(message, state) do
+    if state.client_context do
+      enhanced_message = add_websocket_session_info(message, state)
+
+      case MCPServer.handle_mcp_request(enhanced_message) do
+        response when is_map(response) ->
+          {:reply, {:text, Jason.encode!(response)}, state}
+
+        nil ->
+          # Some notifications don't return responses
+          {:ok, state}
+
+        unexpected ->
+          IO.puts(:stderr, "Unexpected MCP response: #{inspect(unexpected)}")
+          {:ok, state}
+      end
+    else
+      error_response = %{
+        "jsonrpc" => "2.0",
+        "id" => Map.get(message, "id"),
+        "error" => %{
+          "code" => -32002,
+          "message" => "Client must initialize first"
+        }
+      }
+
+      {:reply, {:text, Jason.encode!(error_response)}, state}
+    end
+  end
+
+  defp add_websocket_session_info(message, state) do
+    # Add session tracking info to the message
+    params = Map.get(message, "params", %{})
+
+    enhanced_params =
+      params
+      |> Map.put("_session_id", state.session_id)
+      |> Map.put("_transport", "websocket")
+      |> Map.put("_client_context", %{
+        connection_type: state.client_context.connection_type,
+        security_level: state.client_context.security_level,
+        session_id: state.session_id
+      })
+
+    Map.put(message, "params", enhanced_params)
+  end
+
+  defp tool_allowed_for_context?(tool_name, client_context) do
+    all_tools = MCPServer.get_tools()
+    filtered_tools = ToolFilter.filter_tools(all_tools, client_context)
+
+    Enum.any?(filtered_tools, fn tool ->
+      Map.get(tool, "name") == tool_name
+    end)
+  end
+
+  defp maybe_track_agent_id(message, state) do
+    case get_in(message, ["params", "name"]) do
+      "register_agent" ->
+        # We'll get the agent_id from the response, but for now mark that we expect one
+        %{state | agent_id: :pending}
+
+      _ ->
+        state
+    end
+  end
+
+  defp cleanup_session(state) do
+    # Unregister agent if one was registered through this session
+    if state.agent_id && state.agent_id != :pending do
+      unregister_request = %{
+        "jsonrpc" => "2.0",
+        "id" => generate_request_id(),
+        "method" => "tools/call",
+        "params" => %{
+          "name" => "unregister_agent",
+          "arguments" => %{
+            "agent_id" => state.agent_id,
+            "reason" => "WebSocket connection closed"
+          }
+        }
+      }
+
+      MCPServer.handle_mcp_request(unregister_request)
+    end
+  end
+
+  defp generate_request_id do
+    "ws_req_" <> (:crypto.strong_rand_bytes(8) |> Base.encode16(case: :lower))
+  end
+end

mix.exs

@@ -48,6 +48,12 @@ defmodule AgentCoordinator.MixProject do
       {:gen_stage, "~> 1.2"},
       {:uuid, "~> 1.1"},
 
+      # HTTP server dependencies
+      {:plug, "~> 1.15"},
+      {:plug_cowboy, "~> 2.7"},
+      {:websock_adapter, "~> 0.5"},
+      {:cors_plug, "~> 3.0"},
+
       # Development and testing dependencies
       {:ex_doc, "~> 0.34", only: :dev, runtime: false},
       {:dialyxir, "~> 1.4", only: [:dev], runtime: false},

mix.lock

@@ -2,6 +2,9 @@
   "bunt": {:hex, :bunt, "1.0.0", "081c2c665f086849e6d57900292b3a161727ab40431219529f13c4ddcf3e7a44", [:mix], [], "hexpm", "dc5f86aa08a5f6fa6b8096f0735c4e76d54ae5c9fa2c143e5a1fc7c1cd9bb6b5"},
   "chacha20": {:hex, :chacha20, "1.0.4", "0359d8f9a32269271044c1b471d5cf69660c362a7c61a98f73a05ef0b5d9eb9e", [:mix], [], "hexpm", "2027f5d321ae9903f1f0da7f51b0635ad6b8819bc7fe397837930a2011bc2349"},
   "connection": {:hex, :connection, "1.1.0", "ff2a49c4b75b6fb3e674bfc5536451607270aac754ffd1bdfe175abe4a6d7a68", [:mix], [], "hexpm", "722c1eb0a418fbe91ba7bd59a47e28008a189d47e37e0e7bb85585a016b2869c"},
+  "cors_plug": {:hex, :cors_plug, "3.0.3", "7c3ac52b39624bc616db2e937c282f3f623f25f8d550068b6710e58d04a0e330", [:mix], [{:plug, "~> 1.13", [hex: :plug, repo: "hexpm", optional: false]}], "hexpm", "3f2d759e8c272ed3835fab2ef11b46bddab8c1ab9528167bd463b6452edf830d"},
+  "cowboy": {:hex, :cowboy, "2.13.0", "09d770dd5f6a22cc60c071f432cd7cb87776164527f205c5a6b0f24ff6b38990", [:make, :rebar3], [{:cowlib, ">= 2.14.0 and < 3.0.0", [hex: :cowlib, repo: "hexpm", optional: false]}, {:ranch, ">= 1.8.0 and < 3.0.0", [hex: :ranch, repo: "hexpm", optional: false]}], "hexpm", "e724d3a70995025d654c1992c7b11dbfea95205c047d86ff9bf1cda92ddc5614"},
+  "cowboy_telemetry": {:hex, :cowboy_telemetry, "0.4.0", "f239f68b588efa7707abce16a84d0d2acf3a0f50571f8bb7f56a15865aae820c", [:rebar3], [{:cowboy, "~> 2.7", [hex: :cowboy, repo: "hexpm", optional: false]}, {:telemetry, "~> 1.0", [hex: :telemetry, repo: "hexpm", optional: false]}], "hexpm", "7d98bac1ee4565d31b62d59f8823dfd8356a169e7fcbb83831b8a5397404c9de"},
   "cowlib": {:hex, :cowlib, "2.15.0", "3c97a318a933962d1c12b96ab7c1d728267d2c523c25a5b57b0f93392b6e9e25", [:make, :rebar3], [], "hexpm", "4f00c879a64b4fe7c8fcb42a4281925e9ffdb928820b03c3ad325a617e857532"},
   "credo": {:hex, :credo, "1.7.12", "9e3c20463de4b5f3f23721527fcaf16722ec815e70ff6c60b86412c695d426c1", [:mix], [{:bunt, "~> 0.2.1 or ~> 1.0", [hex: :bunt, repo: "hexpm", optional: false]}, {:file_system, "~> 0.2 or ~> 1.0", [hex: :file_system, repo: "hexpm", optional: false]}, {:jason, "~> 1.0", [hex: :jason, repo: "hexpm", optional: false]}], "hexpm", "8493d45c656c5427d9c729235b99d498bd133421f3e0a683e5c1b561471291e5"},
   "curve25519": {:hex, :curve25519, "1.0.5", "f801179424e4012049fcfcfcda74ac04f65d0ffceeb80e7ef1d3352deb09f5bb", [:mix], [], "hexpm", "0fba3ad55bf1154d4d5fc3ae5fb91b912b77b13f0def6ccb3a5d58168ff4192d"},
@@ -20,11 +23,18 @@
   "makeup": {:hex, :makeup, "1.2.1", "e90ac1c65589ef354378def3ba19d401e739ee7ee06fb47f94c687016e3713d1", [:mix], [{:nimble_parsec, "~> 1.4", [hex: :nimble_parsec, repo: "hexpm", optional: false]}], "hexpm", "d36484867b0bae0fea568d10131197a4c2e47056a6fbe84922bf6ba71c8d17ce"},
   "makeup_elixir": {:hex, :makeup_elixir, "1.0.1", "e928a4f984e795e41e3abd27bfc09f51db16ab8ba1aebdba2b3a575437efafc2", [:mix], [{:makeup, "~> 1.0", [hex: :makeup, repo: "hexpm", optional: false]}, {:nimble_parsec, "~> 1.2.3 or ~> 1.3", [hex: :nimble_parsec, repo: "hexpm", optional: false]}], "hexpm", "7284900d412a3e5cfd97fdaed4f5ed389b8f2b4cb49efc0eb3bd10e2febf9507"},
   "makeup_erlang": {:hex, :makeup_erlang, "1.0.2", "03e1804074b3aa64d5fad7aa64601ed0fb395337b982d9bcf04029d68d51b6a7", [:mix], [{:makeup, "~> 1.0", [hex: :makeup, repo: "hexpm", optional: false]}], "hexpm", "af33ff7ef368d5893e4a267933e7744e46ce3cf1f61e2dccf53a111ed3aa3727"},
+  "mime": {:hex, :mime, "2.0.7", "b8d739037be7cd402aee1ba0306edfdef982687ee7e9859bee6198c1e7e2f128", [:mix], [], "hexpm", "6171188e399ee16023ffc5b76ce445eb6d9672e2e241d2df6050f3c771e80ccd"},
   "nimble_parsec": {:hex, :nimble_parsec, "1.4.2", "8efba0122db06df95bfaa78f791344a89352ba04baedd3849593bfce4d0dc1c6", [:mix], [], "hexpm", "4b21398942dda052b403bbe1da991ccd03a053668d147d53fb8c4e0efe09c973"},
   "nkeys": {:hex, :nkeys, "0.3.0", "837add5261a3cdd8ff75b54e0475062313093929ab5e042fa48e010f33b10d16", [:mix], [{:ed25519, "~> 1.3", [hex: :ed25519, repo: "hexpm", optional: false]}, {:kcl, "~> 1.4", [hex: :kcl, repo: "hexpm", optional: false]}], "hexpm", "b5af773a296620ee8eeb1ec6dc5b68f716386f7e53f7bda8c4ac23515823dfe4"},
   "phoenix_pubsub": {:hex, :phoenix_pubsub, "2.1.3", "3168d78ba41835aecad272d5e8cd51aa87a7ac9eb836eabc42f6e57538e3731d", [:mix], [], "hexpm", "bba06bc1dcfd8cb086759f0edc94a8ba2bc8896d5331a1e2c2902bf8e36ee502"},
+  "plug": {:hex, :plug, "1.18.1", "5067f26f7745b7e31bc3368bc1a2b818b9779faa959b49c934c17730efc911cf", [:mix], [{:mime, "~> 1.0 or ~> 2.0", [hex: :mime, repo: "hexpm", optional: false]}, {:plug_crypto, "~> 1.1.1 or ~> 1.2 or ~> 2.0", [hex: :plug_crypto, repo: "hexpm", optional: false]}, {:telemetry, "~> 0.4.3 or ~> 1.0", [hex: :telemetry, repo: "hexpm", optional: false]}], "hexpm", "57a57db70df2b422b564437d2d33cf8d33cd16339c1edb190cd11b1a3a546cc2"},
+  "plug_cowboy": {:hex, :plug_cowboy, "2.7.4", "729c752d17cf364e2b8da5bdb34fb5804f56251e88bb602aff48ae0bd8673d11", [:mix], [{:cowboy, "~> 2.7", [hex: :cowboy, repo: "hexpm", optional: false]}, {:cowboy_telemetry, "~> 0.3", [hex: :cowboy_telemetry, repo: "hexpm", optional: false]}, {:plug, "~> 1.14", [hex: :plug, repo: "hexpm", optional: false]}], "hexpm", "9b85632bd7012615bae0a5d70084deb1b25d2bcbb32cab82d1e9a1e023168aa3"},
+  "plug_crypto": {:hex, :plug_crypto, "2.1.1", "19bda8184399cb24afa10be734f84a16ea0a2bc65054e23a62bb10f06bc89491", [:mix], [], "hexpm", "6470bce6ffe41c8bd497612ffde1a7e4af67f36a15eea5f921af71cf3e11247c"},
   "poly1305": {:hex, :poly1305, "1.0.4", "7cdc8961a0a6e00a764835918cdb8ade868044026df8ef5d718708ea6cc06611", [:mix], [{:chacha20, "~> 1.0", [hex: :chacha20, repo: "hexpm", optional: false]}, {:equivalex, "~> 1.0", [hex: :equivalex, repo: "hexpm", optional: false]}], "hexpm", "e14e684661a5195e149b3139db4a1693579d4659d65bba115a307529c47dbc3b"},
+  "ranch": {:hex, :ranch, "2.2.0", "25528f82bc8d7c6152c57666ca99ec716510fe0925cb188172f41ce93117b1b0", [:make, :rebar3], [], "hexpm", "fa0b99a1780c80218a4197a59ea8d3bdae32fbff7e88527d7d8a4787eff4f8e7"},
   "salsa20": {:hex, :salsa20, "1.0.4", "404cbea1fa8e68a41bcc834c0a2571ac175580fec01cc38cc70c0fb9ffc87e9b", [:mix], [], "hexpm", "745ddcd8cfa563ddb0fd61e7ce48d5146279a2cf7834e1da8441b369fdc58ac6"},
   "telemetry": {:hex, :telemetry, "1.3.0", "fedebbae410d715cf8e7062c96a1ef32ec22e764197f70cda73d82778d61e7a2", [:rebar3], [], "hexpm", "7015fc8919dbe63764f4b4b87a95b7c0996bd539e0d499be6ec9d7f3875b79e6"},
   "uuid": {:hex, :uuid, "1.1.8", "e22fc04499de0de3ed1116b770c7737779f226ceefa0badb3592e64d5cfb4eb9", [:mix], [], "hexpm", "c790593b4c3b601f5dc2378baae7efaf5b3d73c4c6456ba85759905be792f2ac"},
+  "websock": {:hex, :websock, "0.5.3", "2f69a6ebe810328555b6fe5c831a851f485e303a7c8ce6c5f675abeb20ebdadc", [:mix], [], "hexpm", "6105453d7fac22c712ad66fab1d45abdf049868f253cf719b625151460b8b453"},
+  "websock_adapter": {:hex, :websock_adapter, "0.5.8", "3b97dc94e407e2d1fc666b2fb9acf6be81a1798a2602294aac000260a7c4a47d", [:mix], [{:bandit, ">= 0.6.0", [hex: :bandit, repo: "hexpm", optional: true]}, {:plug, "~> 1.14", [hex: :plug, repo: "hexpm", optional: false]}, {:plug_cowboy, "~> 2.6", [hex: :plug_cowboy, repo: "hexpm", optional: true]}, {:websock, "~> 0.5", [hex: :websock, repo: "hexpm", optional: false]}], "hexpm", "315b9a1865552212b5f35140ad194e67ce31af45bcee443d4ecb96b5fd3f3782"},
 }

nats-server.conf

@@ -0,0 +1,12 @@
+port: 4222
+
+jetstream {
+    store_dir: /var/lib/nats/jetstream
+    max_memory_store: 1GB
+    max_file_store: 10GB
+}
+
+http_port: 8222
+log_file: "/var/log/nats-server.log"
+debug: false
+trace: false

scripts/mcp_launcher.sh

@@ -6,20 +6,27 @@
 
 set -e
 
+CALLER_PWD="${PWD}"
+WORKSPACE_DIR="${MCP_WORKSPACE_DIR:-$CALLER_PWD}"
+
 export PATH="$HOME/.asdf/shims:$PATH"
 
 # Change to the project directory
 cd "$(dirname "$0")/.."
+export MCP_WORKSPACE_DIR="$WORKSPACE_DIR"
 
 # Set environment
 export MIX_ENV="${MIX_ENV:-dev}"
 export NATS_HOST="${NATS_HOST:-localhost}"
 export NATS_PORT="${NATS_PORT:-4222}"
 
-# Log startup
+# Log startup with workspace information
 echo "Starting AgentCoordinator Unified MCP Server..." >&2
 echo "Environment: $MIX_ENV" >&2
 echo "NATS: $NATS_HOST:$NATS_PORT" >&2
+echo "Caller PWD: $CALLER_PWD" >&2
+echo "Workspace Directory: $WORKSPACE_DIR" >&2
+echo "Agent Coordinator Directory: $(pwd)" >&2
 
 # Start the Elixir application with unified MCP server
 exec mix run --no-halt -e "
@@ -37,67 +44,7 @@ end
 # Log that we're ready
 IO.puts(:stderr, \"Unified MCP server ready with automatic task tracking\")
 
-# Handle MCP JSON-RPC messages through the unified server
-defmodule UnifiedMCPStdio do
-  def start do
-    spawn_link(fn -> message_loop() end)
-    Process.sleep(:infinity)
-  end
-
-  defp message_loop do
-    case IO.read(:stdio, :line) do
-      :eof ->
-        IO.puts(:stderr, \"Unified MCP server shutting down\")
-        System.halt(0)
-      {:error, reason} ->
-        IO.puts(:stderr, \"IO Error: #{inspect(reason)}\")
-        System.halt(1)
-      line ->
-        handle_message(String.trim(line))
-        message_loop()
-    end
-  end
-
-  defp handle_message(\"\"), do: :ok
-  defp handle_message(json_line) do
-    try do
-      request = Jason.decode!(json_line)
-
-      # Route through unified MCP server for automatic task tracking
-      response = AgentCoordinator.MCPServer.handle_mcp_request(request)
-      IO.puts(Jason.encode!(response))
-    rescue
-      e in Jason.DecodeError ->
-        error_response = %{
-          \"jsonrpc\" => \"2.0\",
-          \"id\" => nil,
-          \"error\" => %{
-            \"code\" => -32700,
-            \"message\" => \"Parse error: #{Exception.message(e)}\"
-          }
-        }
-        IO.puts(Jason.encode!(error_response))
-      e ->
-        # Try to get the ID from the malformed request
-        id = try do
-          partial = Jason.decode!(json_line)
-          Map.get(partial, \"id\")
-        rescue
-          _ -> nil
-        end
-
-        error_response = %{
-          \"jsonrpc\" => \"2.0\",
-          \"id\" => id,
-          \"error\" => %{
-            \"code\" => -32603,
-            \"message\" => \"Internal error: #{Exception.message(e)}\"
-          }
-        }
-        IO.puts(Jason.encode!(error_response))
-    end
-  end
-end
-
-UnifiedMCPStdio.start()
+# STDIO handling is now managed by InterfaceManager, not here
+# Just keep the process alive
+Process.sleep(:infinity)
 "

scripts/mcp_launcher_multi.sh

@@ -0,0 +1,239 @@
+#!/bin/bash
+
+# AgentCoordinator Multi-Interface MCP Server Launcher
+# This script starts the unified MCP server with support for multiple interface modes:
+# - stdio: Traditional MCP over stdio (default for VSCode)
+# - http: HTTP REST API for remote clients
+# - websocket: WebSocket interface for real-time web clients
+# - remote: Both HTTP and WebSocket
+# - all: All interface modes
+
+set -e
+
+CALLER_PWD="${PWD}"
+WORKSPACE_DIR="${MCP_WORKSPACE_DIR:-$CALLER_PWD}"
+
+export PATH="$HOME/.asdf/shims:$PATH"
+
+# Change to the project directory
+cd "$(dirname "$0")/.."
+export MCP_WORKSPACE_DIR="$WORKSPACE_DIR"
+
+# Parse command line arguments
+INTERFACE_MODE="${1:-stdio}"
+HTTP_PORT="${2:-8080}"
+WS_PORT="${3:-8081}"
+
+# Set environment variables
+export MIX_ENV="${MIX_ENV:-dev}"
+export NATS_HOST="${NATS_HOST:-localhost}"
+export NATS_PORT="${NATS_PORT:-4222}"
+export MCP_INTERFACE_MODE="$INTERFACE_MODE"
+export MCP_HTTP_PORT="$HTTP_PORT"
+export MCP_WS_PORT="$WS_PORT"
+
+# Validate interface mode
+case "$INTERFACE_MODE" in
+    stdio|http|websocket|remote|all)
+        ;;
+    *)
+        echo "Invalid interface mode: $INTERFACE_MODE"
+        echo "Valid modes: stdio, http, websocket, remote, all"
+        exit 1
+        ;;
+esac
+
+# Log startup
+echo "Starting AgentCoordinator Multi-Interface MCP Server..." >&2
+echo "Interface Mode: $INTERFACE_MODE" >&2
+echo "Environment: $MIX_ENV" >&2
+echo "NATS: $NATS_HOST:$NATS_PORT" >&2
+
+if [[ "$INTERFACE_MODE" != "stdio" ]]; then
+    echo "HTTP Port: $HTTP_PORT" >&2
+    echo "WebSocket Port: $WS_PORT" >&2
+fi
+
+# Install dependencies if needed
+if [[ ! -d "deps" ]] || [[ ! -d "_build" ]]; then
+    echo "Installing dependencies..." >&2
+    mix deps.get
+    mix compile
+fi
+
+# Start the appropriate interface mode
+case "$INTERFACE_MODE" in
+    stdio)
+        # Traditional stdio mode for VSCode and local clients
+        exec mix run --no-halt -e "
+# Ensure all applications are started
+{:ok, _} = Application.ensure_all_started(:agent_coordinator)
+
+# Configure interface manager for stdio only
+Application.put_env(:agent_coordinator, :interfaces, %{
+  enabled_interfaces: [:stdio],
+  stdio: %{enabled: true, handle_stdio: true},
+  http: %{enabled: false},
+  websocket: %{enabled: false}
+})
+
+# MCPServer and InterfaceManager are started by the application supervisor automatically
+IO.puts(:stderr, \"STDIO MCP server ready with tool filtering\")
+
+# Handle MCP JSON-RPC messages through the unified server
+defmodule StdioMCPHandler do
+  def start do
+    spawn_link(fn -> message_loop() end)
+    Process.sleep(:infinity)
+  end
+
+  defp message_loop do
+    case IO.read(:stdio, :line) do
+      :eof ->
+        IO.puts(:stderr, \"MCP server shutting down\")
+        System.halt(0)
+      {:error, reason} ->
+        IO.puts(:stderr, \"IO Error: #{inspect(reason)}\")
+        System.halt(1)
+      line ->
+        handle_message(String.trim(line))
+        message_loop()
+    end
+  end
+
+  defp handle_message(\"\"), do: :ok
+  defp handle_message(json_line) do
+    try do
+      request = Jason.decode!(json_line)
+      # Route through unified MCP server with local context (full tool access)
+      response = AgentCoordinator.MCPServer.handle_mcp_request(request)
+      IO.puts(Jason.encode!(response))
+    rescue
+      e in Jason.DecodeError ->
+        error_response = %{
+          \"jsonrpc\" => \"2.0\",
+          \"id\" => nil,
+          \"error\" => %{
+            \"code\" => -32700,
+            \"message\" => \"Parse error: #{Exception.message(e)}\"
+          }
+        }
+        IO.puts(Jason.encode!(error_response))
+      e ->
+        id = try do
+          partial = Jason.decode!(json_line)
+          Map.get(partial, \"id\")
+        rescue
+          _ -> nil
+        end
+
+        error_response = %{
+          \"jsonrpc\" => \"2.0\",
+          \"id\" => id,
+          \"error\" => %{
+            \"code\" => -32603,
+            \"message\" => \"Internal error: #{Exception.message(e)}\"
+          }
+        }
+        IO.puts(Jason.encode!(error_response))
+    end
+  end
+end
+
+StdioMCPHandler.start()
+"
+        ;;
+        
+    http)
+        # HTTP-only mode for REST API clients
+        exec mix run --no-halt -e "
+# Ensure all applications are started
+{:ok, _} = Application.ensure_all_started(:agent_coordinator)
+
+# Configure interface manager for HTTP only
+Application.put_env(:agent_coordinator, :interfaces, %{
+  enabled_interfaces: [:http],
+  stdio: %{enabled: false},
+  http: %{enabled: true, port: $HTTP_PORT, host: \"0.0.0.0\"},
+  websocket: %{enabled: false}
+})
+
+IO.puts(:stderr, \"HTTP MCP server ready on port $HTTP_PORT with tool filtering\")
+IO.puts(:stderr, \"Available endpoints:\")
+IO.puts(:stderr, \"  GET  /health - Health check\")
+IO.puts(:stderr, \"  GET  /mcp/capabilities - Server capabilities\")
+IO.puts(:stderr, \"  GET  /mcp/tools - Available tools (filtered)\")
+IO.puts(:stderr, \"  POST /mcp/tools/:tool_name - Execute tool\")
+IO.puts(:stderr, \"  POST /mcp/request - Full MCP request\")
+IO.puts(:stderr, \"  GET  /agents - Agent status\")
+
+Process.sleep(:infinity)
+"
+        ;;
+        
+    websocket)
+        # WebSocket-only mode
+        exec mix run --no-halt -e "
+# Ensure all applications are started
+{:ok, _} = Application.ensure_all_started(:agent_coordinator)
+
+# Configure interface manager for WebSocket only  
+Application.put_env(:agent_coordinator, :interfaces, %{
+  enabled_interfaces: [:websocket],
+  stdio: %{enabled: false},
+  http: %{enabled: true, port: $WS_PORT, host: \"0.0.0.0\"},
+  websocket: %{enabled: true, port: $WS_PORT}
+})
+
+IO.puts(:stderr, \"WebSocket MCP server ready on port $WS_PORT with tool filtering\")
+IO.puts(:stderr, \"WebSocket endpoint: ws://localhost:$WS_PORT/mcp/ws\")
+
+Process.sleep(:infinity)
+"
+        ;;
+        
+    remote)
+        # Both HTTP and WebSocket for remote clients
+        exec mix run --no-halt -e "
+# Ensure all applications are started
+{:ok, _} = Application.ensure_all_started(:agent_coordinator)
+
+# Configure interface manager for remote access
+Application.put_env(:agent_coordinator, :interfaces, %{
+  enabled_interfaces: [:http, :websocket],
+  stdio: %{enabled: false},
+  http: %{enabled: true, port: $HTTP_PORT, host: \"0.0.0.0\"},
+  websocket: %{enabled: true, port: $HTTP_PORT}
+})
+
+IO.puts(:stderr, \"Remote MCP server ready on port $HTTP_PORT with tool filtering\")
+IO.puts(:stderr, \"HTTP endpoints available at http://localhost:$HTTP_PORT/\")
+IO.puts(:stderr, \"WebSocket endpoint: ws://localhost:$HTTP_PORT/mcp/ws\")
+
+Process.sleep(:infinity)
+"
+        ;;
+        
+    all)
+        # All interface modes
+        exec mix run --no-halt -e "
+# Ensure all applications are started
+{:ok, _} = Application.ensure_all_started(:agent_coordinator)
+
+# Configure interface manager for all interfaces
+Application.put_env(:agent_coordinator, :interfaces, %{
+  enabled_interfaces: [:stdio, :http, :websocket],
+  stdio: %{enabled: true, handle_stdio: false},  # Don't handle stdio in all mode
+  http: %{enabled: true, port: $HTTP_PORT, host: \"0.0.0.0\"},
+  websocket: %{enabled: true, port: $HTTP_PORT}
+})
+
+IO.puts(:stderr, \"Multi-interface MCP server ready with tool filtering\")
+IO.puts(:stderr, \"STDIO: Available for local MCP clients\")
+IO.puts(:stderr, \"HTTP: Available at http://localhost:$HTTP_PORT/\")
+IO.puts(:stderr, \"WebSocket: Available at ws://localhost:$HTTP_PORT/mcp/ws\")
+
+Process.sleep(:infinity)
+"
+        ;;
+esac

scripts/minimal_test.sh

@@ -1,73 +0,0 @@
-#!/bin/bash
-
-# Ultra-minimal test that doesn't start the full application
-
-echo "🔬 Ultra-Minimal AgentCoordinator Test"
-echo "======================================"
-
-cd "$(dirname "$0")"
-
-echo "📋 Testing compilation..."
-if mix compile >/dev/null 2>&1; then
-    echo "✅ Compilation successful"
-else
-    echo "❌ Compilation failed"
-    exit 1
-fi
-
-echo "📋 Testing MCP server without application startup..."
-if timeout 10 mix run --no-start -e "
-# Load compiled modules without starting application
-Code.ensure_loaded(AgentCoordinator.MCPServer)
-
-# Test MCP server directly
-try do
-  # Start just the required processes manually
-  {:ok, _} = Registry.start_link(keys: :unique, name: AgentCoordinator.InboxRegistry)
-  {:ok, _} = Phoenix.PubSub.start_link(name: AgentCoordinator.PubSub)
-
-  # Start TaskRegistry without NATS
-  {:ok, _} = GenServer.start_link(AgentCoordinator.TaskRegistry, [nats: nil], name: AgentCoordinator.TaskRegistry)
-
-  # Start MCP server
-  {:ok, _} = GenServer.start_link(AgentCoordinator.MCPServer, %{}, name: AgentCoordinator.MCPServer)
-
-  IO.puts('✅ Core components started')
-
-  # Test MCP functionality
-  response = AgentCoordinator.MCPServer.handle_mcp_request(%{
-    \"jsonrpc\" => \"2.0\",
-    \"id\" => 1,
-    \"method\" => \"tools/list\"
-  })
-
-  case response do
-    %{\"result\" => %{\"tools\" => tools}} when is_list(tools) ->
-      IO.puts(\"✅ MCP server working (#{length(tools)} tools)\")
-    _ ->
-      IO.puts(\"❌ MCP server not working: #{inspect(response)}\")
-  end
-
-rescue
-  e ->
-    IO.puts(\"❌ Error: #{inspect(e)}\")
-end
-
-System.halt(0)
-"; then
-    echo "✅ Minimal test passed!"
-else
-    echo "❌ Minimal test failed"
-    exit 1
-fi
-
-echo ""
-echo "🎉 Core MCP functionality works!"
-echo ""
-echo "📝 The hanging issue was due to NATS persistence trying to connect."
-echo "    Your MCP server core functionality is working perfectly."
-echo ""
-echo "🚀 To run with proper NATS setup:"
-echo "   1. Make sure NATS server is running: sudo systemctl start nats"
-echo "   2. Or run: nats-server -js -p 4222 -m 8222 &"
-echo "   3. Then use: ../scripts/mcp_launcher.sh"

scripts/quick_test.sh

@@ -1,54 +0,0 @@
-#!/bin/bash
-
-# Quick test script to verify Agentecho "💡 Next steps:"
-echo "   1. Run scripts/setup.sh to configure VS Code integration"
-echo "   2. Or test manually with: scripts/mcp_launcher.sh"rdinator works without getting stuck
-
-echo "🧪 Quick AgentCoordinator Test"
-echo "=============================="
-
-cd "$(dirname "$0")"
-
-echo "📋 Testing basic compilation..."
-if mix compile --force >/dev/null 2>&1; then
-    echo "✅ Compilation successful"
-else
-    echo "❌ Compilation failed"
-    exit 1
-fi
-
-echo "📋 Testing application startup (without persistence)..."
-if timeout 10 mix run -e "
-Application.put_env(:agent_coordinator, :enable_persistence, false)
-{:ok, _apps} = Application.ensure_all_started(:agent_coordinator)
-IO.puts('✅ Application started successfully')
-
-# Quick MCP server test
-response = AgentCoordinator.MCPServer.handle_mcp_request(%{
-  \"jsonrpc\" => \"2.0\",
-  \"id\" => 1,
-  \"method\" => \"tools/list\"
-})
-
-case response do
-  %{\"result\" => %{\"tools\" => tools}} when is_list(tools) ->
-    IO.puts(\"✅ MCP server working (#{length(tools)} tools available)\")
-  _ ->
-    IO.puts(\"❌ MCP server not responding correctly\")
-end
-
-System.halt(0)
-"; then
-    echo "✅ Quick test passed!"
-else
-    echo "❌ Quick test failed"
-    exit 1
-fi
-
-echo ""
-echo "🎉 AgentCoordinator is ready!"
-echo ""
-echo "🚀 Next steps:"
-echo "   1. Run ./setup.sh to configure VS Code integration"
-echo "   2. Or test manually with: ./mcp_launcher.sh"
-echo "   3. Or run Python example: python3 mcp_client_example.py"

scripts/setup.sh

@@ -145,7 +145,7 @@ if [ -f "$SETTINGS_FILE" ]; then
         echo "$MCP_CONFIG" | jq -s '.[0] * .[1]' "$SETTINGS_FILE" - > "$SETTINGS_FILE.tmp"
         mv "$SETTINGS_FILE.tmp" "$SETTINGS_FILE"
     else
-        echo "⚠️  jq not found. Please manually add MCP configuration to $SETTINGS_FILE"
+        echo "jq not found. Please manually add MCP configuration to $SETTINGS_FILE"
         echo "Add this configuration:"
         echo "$MCP_CONFIG"
     fi
@@ -153,25 +153,25 @@ else
     echo "$MCP_CONFIG" > "$SETTINGS_FILE"
 fi
 
-echo "✅ VS Code settings updated"
+echo "VS Code settings updated"
 
 # Test MCP server
-echo -e "\n🧪 Testing MCP server..."
+echo -e "\nTesting MCP server..."
 cd "$PROJECT_DIR"
 if timeout 5 ./scripts/mcp_launcher.sh >/dev/null 2>&1; then
-    echo "✅ MCP server test passed"
+    echo "MCP server test passed"
 else
-    echo "⚠️  MCP server test timed out (this is expected)"
+    echo "MCP server test timed out (this is expected)"
 fi
 
 # Create desktop shortcut for easy access
-echo -e "\n🖥️  Creating desktop shortcuts..."
+echo -e "\nCreating desktop shortcuts..."
 
 # Start script
 cat > "$PROJECT_DIR/start_agent_coordinator.sh" << 'EOF'
 #!/bin/bash
 cd "$(dirname "$0")"
-echo "🚀 Starting AgentCoordinator..."
+echo "Starting AgentCoordinator..."
 
 # Start NATS if not running
 if ! pgrep -f nats-server > /dev/null; then
@@ -191,7 +191,7 @@ chmod +x "$PROJECT_DIR/start_agent_coordinator.sh"
 # Stop script
 cat > "$PROJECT_DIR/stop_agent_coordinator.sh" << 'EOF'
 #!/bin/bash
-echo "🛑 Stopping AgentCoordinator..."
+echo "Stopping AgentCoordinator..."
 
 # Stop NATS if we started it
 if [ -f /tmp/nats.pid ]; then
@@ -203,24 +203,24 @@ fi
 pkill -f "scripts/mcp_launcher.sh" || true
 pkill -f "agent_coordinator" || true
 
-echo "✅ AgentCoordinator stopped"
+echo "AgentCoordinator stopped"
 EOF
 
 chmod +x "$PROJECT_DIR/stop_agent_coordinator.sh"
 
-echo "✅ Created start/stop scripts"
+echo "Created start/stop scripts"
 
 # Final instructions
-echo -e "\n🎉 Setup Complete!"
+echo -e "\nSetup Complete!"
 echo "==================="
 echo ""
-echo "📋 Next Steps:"
+echo "Next Steps:"
 echo ""
-echo "1. 🔄 Restart VS Code to load the new MCP configuration"
+echo "1. Restart VS Code to load the new MCP configuration"
 echo "   - Close all VS Code windows"
 echo "   - Reopen VS Code in your project"
 echo ""
-echo "2. 🤖 GitHub Copilot should now have access to AgentCoordinator tools:"
+echo "2. GitHub Copilot should now have access to AgentCoordinator tools:"
 echo "   - register_agent"
 echo "   - create_task"
 echo "   - get_next_task"
@@ -233,10 +233,9 @@ echo "   - Ask Copilot: 'Register me as an agent with coding capabilities'"
 echo "   - Ask Copilot: 'Create a task to refactor the login module'"
 echo "   - Ask Copilot: 'Show me the task board'"
 echo ""
-echo "📂 Useful files:"
+echo "  Useful files:"
 echo "   - Start server: $PROJECT_DIR/start_agent_coordinator.sh"
 echo "   - Stop server:  $PROJECT_DIR/stop_agent_coordinator.sh"
-echo "   - Test client:  $PROJECT_DIR/mcp_client_example.py"
 echo "   - VS Code settings: $SETTINGS_FILE"
 echo ""
 echo "🔧 Manual start (if needed):"

scripts/test_multi_interface.py

@@ -0,0 +1,282 @@
+#!/usr/bin/env python3
+"""
+Test script for Agent Coordinator Multi-Interface MCP Server.
+
+This script tests:
+1. HTTP interface with tool filtering
+2. WebSocket interface with real-time communication
+3. Tool filtering based on client context
+4. Agent registration and coordination
+"""
+
+import json
+import requests
+import websocket
+import asyncio
+import time
+from concurrent.futures import ThreadPoolExecutor
+
+BASE_URL = "http://localhost:8080"
+WS_URL = "ws://localhost:8080/mcp/ws"
+
+def test_http_interface():
+    """Test HTTP interface and tool filtering."""
+    print("\n=== Testing HTTP Interface ===")
+    
+    # Test health endpoint
+    try:
+        response = requests.get(f"{BASE_URL}/health")
+        print(f"Health check: {response.status_code}")
+        if response.status_code == 200:
+            print(f"Health data: {response.json()}")
+    except Exception as e:
+        print(f"Health check failed: {e}")
+        return False
+    
+    # Test capabilities endpoint
+    try:
+        response = requests.get(f"{BASE_URL}/mcp/capabilities")
+        print(f"Capabilities: {response.status_code}")
+        if response.status_code == 200:
+            caps = response.json()
+            print(f"Tools available: {len(caps.get('tools', []))}")
+            print(f"Connection type: {caps.get('context', {}).get('connection_type')}")
+            print(f"Security level: {caps.get('context', {}).get('security_level')}")
+            
+            # Check that local-only tools are filtered out
+            tool_names = [tool.get('name') for tool in caps.get('tools', [])]
+            local_tools = ['read_file', 'vscode_create_file', 'run_in_terminal']
+            filtered_out = [tool for tool in local_tools if tool not in tool_names]
+            print(f"Local tools filtered out: {filtered_out}")
+    except Exception as e:
+        print(f"Capabilities test failed: {e}")
+        return False
+    
+    # Test tool list endpoint
+    try:
+        response = requests.get(f"{BASE_URL}/mcp/tools")
+        print(f"Tools list: {response.status_code}")
+        if response.status_code == 200:
+            tools = response.json()
+            print(f"Filter stats: {tools.get('_meta', {}).get('filter_stats')}")
+    except Exception as e:
+        print(f"Tools list test failed: {e}")
+        return False
+    
+    # Test agent registration
+    try:
+        register_data = {
+            "arguments": {
+                "name": "Test Agent HTTP",
+                "capabilities": ["testing", "analysis"]
+            }
+        }
+        response = requests.post(f"{BASE_URL}/mcp/tools/register_agent", 
+                               json=register_data,
+                               headers={"Content-Type": "application/json"})
+        print(f"Agent registration: {response.status_code}")
+        if response.status_code == 200:
+            result = response.json()
+            print(f"Registration result: {result.get('result')}")
+            return result.get('result', {}).get('agent_id')
+    except Exception as e:
+        print(f"Agent registration failed: {e}")
+        return False
+    
+    return True
+
+def test_websocket_interface():
+    """Test WebSocket interface with real-time communication."""
+    print("\n=== Testing WebSocket Interface ===")
+    
+    messages_received = []
+    
+    def on_message(ws, message):
+        print(f"Received: {message}")
+        messages_received.append(json.loads(message))
+    
+    def on_error(ws, error):
+        print(f"WebSocket error: {error}")
+    
+    def on_close(ws, close_status_code, close_msg):
+        print("WebSocket connection closed")
+    
+    def on_open(ws):
+        print("WebSocket connection opened")
+        
+        # Send initialize message
+        init_msg = {
+            "jsonrpc": "2.0",
+            "id": 1,
+            "method": "initialize",
+            "params": {
+                "protocolVersion": "2024-11-05",
+                "clientInfo": {
+                    "name": "test-websocket-client",
+                    "version": "1.0.0"
+                },
+                "capabilities": ["coordination"]
+            }
+        }
+        ws.send(json.dumps(init_msg))
+        
+        # Wait a bit then request tools list
+        time.sleep(0.5)
+        tools_msg = {
+            "jsonrpc": "2.0", 
+            "id": 2,
+            "method": "tools/list"
+        }
+        ws.send(json.dumps(tools_msg))
+        
+        # Register an agent
+        time.sleep(0.5)
+        register_msg = {
+            "jsonrpc": "2.0",
+            "id": 3,
+            "method": "tools/call",
+            "params": {
+                "name": "register_agent",
+                "arguments": {
+                    "name": "Test Agent WebSocket",
+                    "capabilities": ["testing", "websocket"]
+                }
+            }
+        }
+        ws.send(json.dumps(register_msg))
+        
+        # Close after a delay
+        time.sleep(2)
+        ws.close()
+    
+    try:
+        ws = websocket.WebSocketApp(WS_URL,
+                                  on_open=on_open,
+                                  on_message=on_message,
+                                  on_error=on_error,
+                                  on_close=on_close)
+        ws.run_forever()
+        
+        print(f"Messages received: {len(messages_received)}")
+        for i, msg in enumerate(messages_received):
+            print(f"Message {i+1}: {msg.get('result', {}).get('_meta', 'No meta')}")
+        
+        return len(messages_received) > 0
+    except Exception as e:
+        print(f"WebSocket test failed: {e}")
+        return False
+
+def test_tool_filtering():
+    """Test tool filtering functionality specifically."""
+    print("\n=== Testing Tool Filtering ===")
+    
+    try:
+        # Get tools from HTTP (remote context)
+        response = requests.get(f"{BASE_URL}/mcp/tools")
+        if response.status_code != 200:
+            print("Failed to get tools from HTTP")
+            return False
+        
+        remote_tools = response.json()
+        tool_names = [tool.get('name') for tool in remote_tools.get('tools', [])]
+        
+        # Check that coordination tools are present
+        coordination_tools = ['register_agent', 'create_task', 'get_task_board', 'heartbeat']
+        present_coordination = [tool for tool in coordination_tools if tool in tool_names]
+        print(f"Coordination tools present: {present_coordination}")
+        
+        # Check that local-only tools are filtered out
+        local_only_tools = ['read_file', 'write_file', 'vscode_create_file', 'run_in_terminal']
+        filtered_local = [tool for tool in local_only_tools if tool not in tool_names]
+        print(f"Local-only tools filtered: {filtered_local}")
+        
+        # Check that safe remote tools are present
+        safe_remote_tools = ['create_entities', 'sequentialthinking', 'get-library-docs']
+        present_safe = [tool for tool in safe_remote_tools if tool in tool_names]
+        print(f"Safe remote tools present: {present_safe}")
+        
+        # Verify filter statistics
+        filter_stats = remote_tools.get('_meta', {}).get('filter_stats', {})
+        print(f"Filter stats: {filter_stats}")
+        
+        success = (
+            len(present_coordination) >= 3 and  # Most coordination tools present
+            len(filtered_local) >= 2 and        # Local tools filtered
+            filter_stats.get('connection_type') == 'remote'
+        )
+        
+        return success
+    except Exception as e:
+        print(f"Tool filtering test failed: {e}")
+        return False
+
+def test_forbidden_tool_access():
+    """Test that local-only tools are properly blocked for remote clients."""
+    print("\n=== Testing Forbidden Tool Access ===")
+    
+    try:
+        # Try to call a local-only tool
+        forbidden_data = {
+            "arguments": {
+                "path": "/etc/passwd",
+                "agent_id": "test_agent"
+            }
+        }
+        response = requests.post(f"{BASE_URL}/mcp/tools/read_file",
+                               json=forbidden_data,
+                               headers={"Content-Type": "application/json"})
+        
+        print(f"Forbidden tool call status: {response.status_code}")
+        if response.status_code == 403:
+            error_data = response.json()
+            print(f"Expected 403 error: {error_data.get('error', {}).get('message')}")
+            return True
+        else:
+            print(f"Unexpected response: {response.json()}")
+            return False
+    except Exception as e:
+        print(f"Forbidden tool test failed: {e}")
+        return False
+
+def main():
+    """Run all tests."""
+    print("Agent Coordinator Multi-Interface Test Suite")
+    print("=" * 50)
+    
+    # Test results
+    results = {}
+    
+    # HTTP Interface Test
+    results['http'] = test_http_interface()
+    
+    # WebSocket Interface Test  
+    results['websocket'] = test_websocket_interface()
+    
+    # Tool Filtering Test
+    results['tool_filtering'] = test_tool_filtering()
+    
+    # Forbidden Access Test
+    results['forbidden'] = test_forbidden_tool_access()
+    
+    # Summary
+    print("\n" + "=" * 50)
+    print("TEST RESULTS SUMMARY")
+    print("=" * 50)
+    
+    for test_name, success in results.items():
+        status = "✅ PASS" if success else "❌ FAIL"
+        print(f"{test_name.ljust(20)}: {status}")
+    
+    total_tests = len(results)
+    passed_tests = sum(results.values())
+    print(f"\nOverall: {passed_tests}/{total_tests} tests passed")
+    
+    if passed_tests == total_tests:
+        print("🎉 All tests passed! Multi-interface MCP server is working correctly.")
+        return 0
+    else:
+        print("⚠️  Some tests failed. Check the implementation.")
+        return 1
+
+if __name__ == "__main__":
+    exit(main())

test/test_agent_specific_tasks.exs

@@ -14,16 +14,19 @@ IO.puts("=" |> String.duplicate(60))
 try do
   TaskRegistry.start_link()
 rescue
-  _ -> :ok  # Already started
+  # Already started
+  _ -> :ok
 end
 
 try do
   MCPServer.start_link()
 rescue
-  _ -> :ok  # Already started
+  # Already started
+  _ -> :ok
 end
 
-Process.sleep(1000)  # Give services time to start
+# Give services time to start
+Process.sleep(1000)
 
 # Test 1: Register two agents
 IO.puts("\n1️⃣ Registering two test agents...")
@@ -58,23 +61,27 @@ resp1 = MCPServer.handle_mcp_request(agent1_req)
 resp2 = MCPServer.handle_mcp_request(agent2_req)
 
 # Extract agent IDs
-agent1_id = case resp1 do
-  %{"result" => %{"content" => [%{"text" => text}]}} ->
-    data = Jason.decode!(text)
-    data["agent_id"]
-  _ ->
-    IO.puts("❌ Failed to register agent 1: #{inspect(resp1)}")
-    System.halt(1)
-end
+agent1_id =
+  case resp1 do
+    %{"result" => %{"content" => [%{"text" => text}]}} ->
+      data = Jason.decode!(text)
+      data["agent_id"]
 
-agent2_id = case resp2 do
-  %{"result" => %{"content" => [%{"text" => text}]}} ->
-    data = Jason.decode!(text)
-    data["agent_id"]
-  _ ->
-    IO.puts("❌ Failed to register agent 2: #{inspect(resp2)}")
-    System.halt(1)
-end
+    _ ->
+      IO.puts("❌ Failed to register agent 1: #{inspect(resp1)}")
+      System.halt(1)
+  end
+
+agent2_id =
+  case resp2 do
+    %{"result" => %{"content" => [%{"text" => text}]}} ->
+      data = Jason.decode!(text)
+      data["agent_id"]
+
+    _ ->
+      IO.puts("❌ Failed to register agent 2: #{inspect(resp2)}")
+      System.halt(1)
+  end
 
 IO.puts("✅ Agent 1 (Alpha Wolf): #{agent1_id}")
 IO.puts("✅ Agent 2 (Beta Tiger): #{agent2_id}")
@@ -219,7 +226,7 @@ history_req1 = %{
 history_resp1 = MCPServer.handle_mcp_request(history_req1)
 IO.puts("Agent 1 history: #{inspect(history_resp1)}")
 
-IO.puts("\n" <> "=" |> String.duplicate(60))
+IO.puts(("\n" <> "=") |> String.duplicate(60))
 IO.puts("🎉 AGENT-SPECIFIC TASK POOLS TEST COMPLETE!")
 IO.puts("✅ Each agent now has their own task pool")
 IO.puts("✅ No more task chaos or cross-contamination")

test/test_agent_task_pools.exs

@@ -202,6 +202,7 @@ defmodule AgentTaskPoolTest do
       %{"result" => %{"content" => [%{"text" => text}]}} ->
         data = Jason.decode!(text)
         data["agent_id"]
+
       _ ->
         "unknown"
     end

test/test_isolation.exs

@@ -30,24 +30,27 @@ Process.sleep(1000)
 IO.puts("\n2️⃣ Creating agent-specific tasks...")
 
 # Tasks for Agent 1
-task1_agent1 = Task.new("Fix auth bug", "Debug authentication issue", %{
-  priority: :high,
-  assigned_agent: agent1.id,
-  metadata: %{agent_created: true}
-})
+task1_agent1 =
+  Task.new("Fix auth bug", "Debug authentication issue", %{
+    priority: :high,
+    assigned_agent: agent1.id,
+    metadata: %{agent_created: true}
+  })
 
-task2_agent1 = Task.new("Add auth tests", "Write auth tests", %{
-  priority: :normal,
-  assigned_agent: agent1.id,
-  metadata: %{agent_created: true}
-})
+task2_agent1 =
+  Task.new("Add auth tests", "Write auth tests", %{
+    priority: :normal,
+    assigned_agent: agent1.id,
+    metadata: %{agent_created: true}
+  })
 
 # Tasks for Agent 2
-task1_agent2 = Task.new("Write API docs", "Document endpoints", %{
-  priority: :normal,
-  assigned_agent: agent2.id,
-  metadata: %{agent_created: true}
-})
+task1_agent2 =
+  Task.new("Write API docs", "Document endpoints", %{
+    priority: :normal,
+    assigned_agent: agent2.id,
+    metadata: %{agent_created: true}
+  })
 
 # Add tasks to respective inboxes
 Inbox.add_task(agent1.id, task1_agent1)
@@ -76,7 +79,12 @@ IO.puts("\n4️⃣ Checking remaining tasks...")
 status1 = Inbox.get_status(agent1.id)
 status2 = Inbox.get_status(agent2.id)
 
-IO.puts("Agent 1: #{status1.pending_count} pending, current: #{if status1.current_task, do: status1.current_task.title, else: "none"}")
-IO.puts("Agent 2: #{status2.pending_count} pending, current: #{if status2.current_task, do: status2.current_task.title, else: "none"}")
+IO.puts(
+  "Agent 1: #{status1.pending_count} pending, current: #{if status1.current_task, do: status1.current_task.title, else: "none"}"
+)
+
+IO.puts(
+  "Agent 2: #{status2.pending_count} pending, current: #{if status2.current_task, do: status2.current_task.title, else: "none"}"
+)
 
 IO.puts("\n🎉 SUCCESS! Agent-specific task pools working!")

test/test_multi_interface.exs

@@ -0,0 +1,63 @@
+#!/usr/bin/env elixir
+
+# Simple test script to verify multi-interface functionality
+Mix.install([
+  {:jason, "~> 1.4"}
+])
+
+defmodule MultiInterfaceTest do
+  def test_stdio_mode do
+    IO.puts("Testing STDIO mode...")
+
+    # Start the application manually in stdio mode
+    System.put_env("MCP_INTERFACE_MODE", "stdio")
+
+    IO.puts("✅ STDIO mode configuration test passed")
+  end
+
+  def test_http_mode do
+    IO.puts("Testing HTTP mode configuration...")
+
+    # Test HTTP mode configuration
+    System.put_env("MCP_INTERFACE_MODE", "http")
+    System.put_env("MCP_HTTP_PORT", "8080")
+    System.put_env("MCP_HTTP_HOST", "127.0.0.1")
+
+    IO.puts("✅ HTTP mode configuration test passed")
+  end
+
+  def test_multi_mode do
+    IO.puts("Testing multi-interface mode...")
+
+    # Test multiple interfaces
+    System.put_env("MCP_INTERFACE_MODE", "stdio,http,websocket")
+    System.put_env("MCP_HTTP_PORT", "8080")
+
+    IO.puts("✅ Multi-interface mode configuration test passed")
+  end
+
+  def run_tests do
+    IO.puts("🚀 Testing Multi-Interface MCP Server")
+    IO.puts("====================================")
+
+    test_stdio_mode()
+    test_http_mode()
+    test_multi_mode()
+
+    IO.puts("")
+    IO.puts("✅ All configuration tests passed!")
+    IO.puts("You can now test the actual server with:")
+    IO.puts("")
+    IO.puts("  # STDIO mode (default)")
+    IO.puts("  mix run --no-halt")
+    IO.puts("")
+    IO.puts("  # HTTP mode")
+    IO.puts("  MCP_INTERFACE_MODE=http MCP_HTTP_PORT=8080 mix run --no-halt")
+    IO.puts("")
+    IO.puts("  # Multi-interface mode")
+    IO.puts("  MCP_INTERFACE_MODE=stdio,http,websocket MCP_HTTP_PORT=8080 mix run --no-halt")
+    IO.puts("")
+  end
+end
+
+MultiInterfaceTest.run_tests()

test/test_session_management.exs

@@ -0,0 +1,157 @@
+#!/usr/bin/env elixir
+
+# Quick test script for the enhanced MCP session management
+# This tests the new session token authentication flow
+
+Mix.install([
+  {:jason, "~> 1.4"},
+  {:httpoison, "~> 2.0"}
+])
+
+defmodule SessionManagementTest do
+  @base_url "http://localhost:4000"
+
+  def run_test do
+    IO.puts("🔧 Testing Enhanced MCP Session Management")
+    IO.puts("=" <> String.duplicate("=", 50))
+
+    # Step 1: Register an agent to get a session token
+    IO.puts("\n1️⃣  Registering agent to get session token...")
+
+    register_payload = %{
+      "jsonrpc" => "2.0",
+      "id" => "test_001",
+      "method" => "agents/register",
+      "params" => %{
+        "name" => "Test Agent Blue Koala",
+        "capabilities" => ["coding", "testing"],
+        "codebase_id" => "test_codebase",
+        "workspace_path" => "/tmp/test"
+      }
+    }
+
+    case post_mcp_request("/mcp/request", register_payload) do
+      {:ok, %{"result" => result}} ->
+        session_token = Map.get(result, "session_token")
+        expires_at = Map.get(result, "expires_at")
+
+        IO.puts("✅ Agent registered successfully!")
+        IO.puts("   Session Token: #{String.slice(session_token || "nil", 0, 20)}...")
+        IO.puts("   Expires At: #{expires_at}")
+
+        if session_token do
+          test_authenticated_request(session_token)
+        else
+          IO.puts("❌ No session token returned!")
+        end
+
+      {:ok, %{"error" => error}} ->
+        IO.puts("❌ Registration failed: #{inspect(error)}")
+
+      {:error, reason} ->
+        IO.puts("❌ Request failed: #{reason}")
+    end
+
+    # Step 2: Test MCP protocol headers
+    IO.puts("\n2️⃣  Testing MCP protocol headers...")
+    test_protocol_headers()
+
+    IO.puts("\n🎉 Session management test completed!")
+  end
+
+  defp test_authenticated_request(session_token) do
+    IO.puts("\n🔐 Testing authenticated request with session token...")
+
+    # Try to call a tool that requires authentication
+    tool_payload = %{
+      "jsonrpc" => "2.0",
+      "id" => "test_002",
+      "method" => "tools/call",
+      "params" => %{
+        "name" => "get_task_board",
+        "arguments" => %{"agent_id" => "Test Agent Blue Koala"}
+      }
+    }
+
+    headers = [
+      {"Content-Type", "application/json"},
+      {"Mcp-Session-Id", session_token}
+    ]
+
+    case HTTPoison.post("#{@base_url}/mcp/request", Jason.encode!(tool_payload), headers) do
+      {:ok, %HTTPoison.Response{status_code: 200, headers: response_headers, body: body}} ->
+        IO.puts("✅ Authenticated request successful!")
+
+        # Check for MCP protocol headers
+        mcp_version = get_header_value(response_headers, "mcp-protocol-version")
+        IO.puts("   MCP Protocol Version: #{mcp_version || "Not found"}")
+
+        # Parse response
+        case Jason.decode(body) do
+          {:ok, %{"result" => _result}} ->
+            IO.puts("   ✅ Valid MCP response received")
+
+          {:ok, %{"error" => error}} ->
+            IO.puts("   ⚠️  MCP error: #{inspect(error)}")
+
+          _ ->
+            IO.puts("   ❌ Invalid response format")
+        end
+
+      {:ok, %HTTPoison.Response{status_code: status_code, body: body}} ->
+        IO.puts("❌ Request failed with status #{status_code}")
+
+        case Jason.decode(body) do
+          {:ok, parsed} -> IO.puts("   Error: #{inspect(parsed)}")
+          _ -> IO.puts("   Body: #{body}")
+        end
+
+      {:error, reason} ->
+        IO.puts("❌ HTTP request failed: #{inspect(reason)}")
+    end
+  end
+
+  defp test_protocol_headers do
+    case HTTPoison.get("#{@base_url}/health") do
+      {:ok, %HTTPoison.Response{headers: headers}} ->
+        mcp_version = get_header_value(headers, "mcp-protocol-version")
+        server_header = get_header_value(headers, "server")
+
+        IO.puts("✅ Protocol headers check:")
+        IO.puts("   MCP-Protocol-Version: #{mcp_version || "❌ Missing"}")
+        IO.puts("   Server: #{server_header || "❌ Missing"}")
+
+      {:error, reason} ->
+        IO.puts("❌ Failed to test headers: #{inspect(reason)}")
+    end
+  end
+
+  defp post_mcp_request(endpoint, payload) do
+    headers = [{"Content-Type", "application/json"}]
+
+    case HTTPoison.post("#{@base_url}#{endpoint}", Jason.encode!(payload), headers) do
+      {:ok, %HTTPoison.Response{status_code: 200, body: body}} ->
+        Jason.decode(body)
+
+      {:ok, %HTTPoison.Response{status_code: status_code, body: body}} ->
+        {:error, "HTTP #{status_code}: #{body}"}
+
+      {:error, reason} ->
+        {:error, inspect(reason)}
+    end
+  end
+
+  defp get_header_value(headers, header_name) do
+    headers
+    |> Enum.find(fn {name, _value} ->
+      String.downcase(name) == String.downcase(header_name)
+    end)
+    |> case do
+      {_name, value} -> value
+      nil -> nil
+    end
+  end
+end
+
+# Run the test
+SessionManagementTest.run_test()

test/test_vscode_init.exs

@@ -10,6 +10,7 @@ Process.sleep(1000)
 
 # Test 1: Initialize call (system call, should work without agent_id)
 IO.puts("Testing initialize call...")
+
 init_request = %{
   "jsonrpc" => "2.0",
   "id" => 1,
@@ -31,6 +32,7 @@ IO.puts("Initialize response: #{inspect(init_response)}")
 
 # Test 2: Tools/list call (system call, should work without agent_id)
 IO.puts("\nTesting tools/list call...")
+
 tools_request = %{
   "jsonrpc" => "2.0",
   "id" => 2,
@@ -42,6 +44,7 @@ IO.puts("Tools/list response: #{inspect(tools_response)}")
 
 # Test 3: Register agent call (should work)
 IO.puts("\nTesting register_agent call...")
+
 register_request = %{
   "jsonrpc" => "2.0",
   "id" => 3,
@@ -59,7 +62,8 @@ register_response = GenServer.call(AgentCoordinator.MCPServer, {:mcp_request, re
 IO.puts("Register agent response: #{inspect(register_response)}")
 
 # Test 4: Try a call that requires agent_id (should fail without agent_id)
-IO.puts("\nTesting call that requires agent_id (should fail)...")
+IO.puts("Testing call that requires agent_id (should fail)...")
+
 task_request = %{
   "jsonrpc" => "2.0",
   "id" => 4,
@@ -76,4 +80,4 @@ task_request = %{
 task_response = GenServer.call(AgentCoordinator.MCPServer, {:mcp_request, task_request})
 IO.puts("Task creation response: #{inspect(task_response)}")
 
-IO.puts("\n✅ All tests completed!")"
+IO.puts("All tests completed!")

test/test_vscode_integration.exs

@@ -11,14 +11,17 @@ IO.puts("Testing VS Code tool integration...")
 
 # Check if VS Code tools are available
 tools = AgentCoordinator.MCPServer.get_tools()
-vscode_tools = Enum.filter(tools, fn tool -> 
-  case Map.get(tool, "name") do
-    "vscode_" <> _ -> true
-    _ -> false
-  end
-end)
+
+vscode_tools =
+  Enum.filter(tools, fn tool ->
+    case Map.get(tool, "name") do
+      "vscode_" <> _ -> true
+      _ -> false
+    end
+  end)
 
 IO.puts("Found #{length(vscode_tools)} VS Code tools:")
+
 Enum.each(vscode_tools, fn tool ->
   IO.puts("  - #{tool["name"]}")
 end)